Pairwise Alignments

Query, 417 a.a., putative exodeoxyribonuclease VII large subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 523 a.a., exodeoxyribonuclease VII, large subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 87/367 (23%), Positives = 158/367 (43%), Gaps = 39/367 (10%)

Query: 8   ELNALVRRSLEQCLPDEYWIQAELSDVRSNTTGHCYLEFVQKDPRSNNLVAKARGMIWSN 67
           EL+  ++R+LE        ++ E+  V    +GH Y +   KD R+       +G +   
Sbjct: 23  ELSGAIKRTLEGEF-GRVRVRGEIGRVMRAKSGHLYFDL--KDARAVINCTTWKGQV--- 76

Query: 68  IYRLLKPYFEETTGQLFASGIKVLVKVTVQFH---ELYGYSLTVLDIDPAYTLGDMARRR 124
                        G +   G++V+ +  +  +     Y  ++  + +     L  M  +R
Sbjct: 77  ----------SGLGVMPEEGLEVVAEGKLSAYAPASRYNINVDRISVAGIGALMAMLEKR 126

Query: 125 REILMQLEEEGVLTLNKELEMPVLPQRIAVISSATAAGYGDFCHQLQHNSGGFFFYTELF 184
           +  L     EG+   +++  +P LP+ I V++S + A   D  H+L+           ++
Sbjct: 127 KAALTA---EGLFEASRKQPLPFLPEVIGVVTSPSGAVIRDILHRLRDRCPRKVL---IW 180

Query: 185 PALMQGNQVEESVLAALDRIN-----DRVNEFDVVVIIRGGGATSDLSGFDTYLLAAACA 239
           P  +QG      V  A+   N       +   D++++ RGGG+  DL GF+  ++  A A
Sbjct: 181 PVAVQGQNCAPEVANAIRGFNALGPGGPLPRPDLLIVARGGGSLEDLWGFNEEIVVRAAA 240

Query: 240 QFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRITESADHLEELSARLQQGAY 299
           +  +P+I+ +GHE D T++D  A  R  TPTAAAE  +    +    L+ L +R+  G  
Sbjct: 241 ESDIPLISAVGHETDTTLIDYAADWRAPTPTAAAERAVPVRLDLLAALDSLGSRMLTGLT 300

Query: 300 ALLEQEGRRLEMIQTRIP------NLVHRKLTDARFALLAAGKDLAQATQTLLSRHRHRL 353
             +    +R+  +   +P      +   ++L  A   L AA   L  ATQT         
Sbjct: 301 GGVRARAQRVRDLSRALPRSEDLLSTPRQRLDHATARLPAA---LRSATQTKRGALTQAA 357

Query: 354 ELLRQRV 360
            +LR R+
Sbjct: 358 AVLRPRL 364



 Score = 34.7 bits (78), Expect = 7e-06
 Identities = 46/157 (29%), Positives = 61/157 (38%), Gaps = 12/157 (7%)

Query: 258 LDSVAHTRVKTPTAAA-----ELLIHRITESADHLEELSARLQQGAYALLEQEGRRLEMI 312
           L S   T+    T AA      LL  RI      L   SARL  GA AL      + E +
Sbjct: 342 LRSATQTKRGALTQAAAVLRPRLLAGRIEAERKDLRAASARL--GA-ALPRAVAAQAERL 398

Query: 313 QTRIPNLVHRKLTDARFA----LLAAGKDLAQATQTLLSRHRHRLELLRQRVADASPDKL 368
           +TR+  L    LT  R      L A    L++A    +   R  L+ L +  A    +  
Sbjct: 399 RTRVARLRGEILTQGRARDQQRLEALSARLSRAGTAQVRTWRRTLDGLDRVRATVGYEAT 458

Query: 369 LSRGYSITLKDGKAVTDAASLNPGDQLVTRLAKGSFT 405
           L RGY++       VT AA+      L  + A G  T
Sbjct: 459 LKRGYAVVRDQDSIVTTAAAAATHPSLEVQFADGRVT 495