Pairwise Alignments

Query, 414 a.a., ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

 Score =  397 bits (1020), Expect = e-115
 Identities = 208/394 (52%), Positives = 282/394 (71%), Gaps = 14/394 (3%)

Query: 10  CSFCGRSENEVGFLITGMNGYICDSCATQAYEITQEALGE--GRKRAGATKLNLKELPKP 67
           CSFCG+S++EV  LI G + YICD C     +I +E + +   +K + A       LP P
Sbjct: 16  CSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKKESAA-------LPTP 68

Query: 68  VEIKKFLDQYVIGQDDAKRFLSVSVYNHYKRLLQKDS-GDDVEIEKSNIIMVGSTGTGKT 126
            +I++ LD YVIGQ+ AK+ L+V+VYNHYKRL   D+  + VE+ KSNI+++G TG+GKT
Sbjct: 69  RKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSGKT 128

Query: 127 LLARTIAKLLHVPFTIVDATVLTEAGYVGEDIESILTRLLQVADYNVPEAEQGIVFIDEI 186
           LLA T+A+LL VPFT+ DAT LTEAGYVGED+E+I+ +LLQ  DY+V +AE+GIV+IDEI
Sbjct: 129 LLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEI 188

Query: 187 DKIARKGDNPSITRDVSGEGVQQGLLKLLEGSVVNVPPQGGRKHPDQKMIPVNTKNILFI 246
           DKI+RK +NPSITRDVSGEGVQQ LLKL+EG+V +VPPQGGRKHP Q+ + V+T  ILFI
Sbjct: 189 DKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKILFI 248

Query: 247 CGGAFDGIEKKIAQRLNTHV-VGYTASQKTAVIDK--NNMMQYIAPQDLKSFGLIPEIIG 303
           CGGAF G++K I QR+ T   +G+ A  ++    K  + +   + P+DL  +GLIPE IG
Sbjct: 249 CGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLVKYGLIPEFIG 308

Query: 304 RLPVLTYLNPLDRNALRAILTEPKNSIIKQYIKLFEMDGIKLTFEDSVFEYIVDKAVEYK 363
           RLPV   L  LD  AL  IL EPKN++ KQY  LFE++ + L F +   + I  KA++ K
Sbjct: 309 RLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKAMKRK 368

Query: 364 LGARGLRSIVETIMMDVMFEIPSESKKEYKVTLD 397
            GARGLRSI+E ++++ M+E+PS  ++  KV +D
Sbjct: 369 TGARGLRSILEAVLLETMYELPS-MEEVSKVVID 401