Pairwise Alignments

Query, 414 a.a., ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 512 a.a., ATP-dependent protease ATP-binding subunit ClpX (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  393 bits (1009), Expect = e-114
 Identities = 198/387 (51%), Positives = 278/387 (71%), Gaps = 11/387 (2%)

Query: 4   SKTKKKCSFCGRSENEVGFLITGMNGYICDSCATQAYEI-TQEALGEGRKRAGATKLNLK 62
           S+ + +CSFCG+ ++ V  LI G   YICD C +   EI  QE + E  +          
Sbjct: 8   SERELRCSFCGKGQDAVQRLIAGPGVYICDECVSLCNEIIAQEHITETVEEG-------- 59

Query: 63  ELPKPVEIKKFLDQYVIGQDDAKRFLSVSVYNHYKRLLQKDS-GDDVEIEKSNIIMVGST 121
           +L  P EIK  LD+YVIGQ  AK+ LSV+V+NHYKR+    + G +VE+EKSNI+++G +
Sbjct: 60  KLLTPAEIKAKLDEYVIGQHQAKKILSVAVHNHYKRVFFASALGGEVELEKSNILLIGPS 119

Query: 122 GTGKTLLARTIAKLLHVPFTIVDATVLTEAGYVGEDIESILTRLLQVADYNVPEAEQGIV 181
           G+GKTLLA+T+A++L VPF I DAT LTEAGYVGED+E+IL +LLQ ADY++  A +GI+
Sbjct: 120 GSGKTLLAKTLARVLKVPFAIADATTLTEAGYVGEDVENILVQLLQNADYDIEAASKGII 179

Query: 182 FIDEIDKIARKGDNPSITRDVSGEGVQQGLLKLLEGSVVNVPPQGGRKHPDQKMIPVNTK 241
           +IDEIDKI+RKGD PSITRDVSGEGVQQ LLK++EG+  N+PP+GGRKHP Q+ I ++T 
Sbjct: 180 YIDEIDKISRKGDGPSITRDVSGEGVQQALLKIIEGTEANIPPKGGRKHPQQEFIRMDTS 239

Query: 242 NILFICGGAFDGIEKKIAQRLNTHVVGYTASQKTAV-IDKNNMMQYIAPQDLKSFGLIPE 300
           NILFI GGAF G++K I QR+    +G+ A   T   +    ++  + P DL  FGLIPE
Sbjct: 240 NILFILGGAFIGLDKLIGQRIGGGAMGFGAKVATRKDLPFGELLGQVHPNDLVKFGLIPE 299

Query: 301 IIGRLPVLTYLNPLDRNALRAILTEPKNSIIKQYIKLFEMDGIKLTFEDSVFEYIVDKAV 360
            +GR+PV+T++  L  + L  ILTEPKN++++QY KLFE+D + L F  +  + I  +A+
Sbjct: 300 FVGRIPVVTHVEELSEDDLVRILTEPKNALVRQYQKLFELDKVNLRFTANALKSIASQAI 359

Query: 361 EYKLGARGLRSIVETIMMDVMFEIPSE 387
           E K GARGLR+++E++M+D+M+++PS+
Sbjct: 360 ERKTGARGLRNVMESVMLDIMYKLPSQ 386