Pairwise Alignments

Query, 81 a.a., putative RNA-binding protein rbpA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 142 a.a., RNA-binding region RNP-1 from Synechococcus elongatus PCC 7942

 Score = 64.7 bits (156), Expect = 3e-16
 Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 1/80 (1%)

Query: 1  MNIYVGNLNYRVKEGDLQQVMEDYGAVSSVKVVMDRETGKSKGFAFIEMEDDAAAAKAIA 60
          + +Y+GNL   +++ +L  V  + G VS+ K+V DR+TGKS+GFAF  +  D  A   I 
Sbjct: 3  VRVYIGNLPRDIEQAELDAVFAEAGEVSA-KLVTDRKTGKSRGFAFATVASDELADALIE 61

Query: 61 ELNGAEYMGRTMVVKEARPR 80
            NG E  G T+ +++A+PR
Sbjct: 62 RFNGTEVQGSTLKLEKAQPR 81