Pairwise Alignments

Query, 170 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 176 a.a., starvation induced DNA binding protein from Synechococcus elongatus PCC 7942

 Score = 43.1 bits (100), Expect = 2e-09
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 1/137 (0%)

Query: 22  LNAALSEEWLAYYQYWVGALVVEGAMRADVQGEFEEHAEEERRHAQLLADRIIELEGVPV 81
           LN AL+   + Y QY      V+GA    +   FE+     + H   L +R+  L GVPV
Sbjct: 32  LNRALASFQVLYLQYQKHHFTVQGAEFYSLHEFFEDSYGSVKDHVHDLGERLNGLGGVPV 91

Query: 82  LDPKKWFELARCKYDAPQGFDSVSLLKDNVASERCAILRYQEI-ADFTNGKDFTTCDIAK 140
             P K  EL     +    F+  ++L+ ++A+E+  +   + + A   +  D  T  + +
Sbjct: 92  AHPLKLAELTCFAIEEDGVFNCRTMLEHDLAAEQAILSLLRRLTAQVESLGDRATRYLLE 151

Query: 141 HILAEEEEHEQDLQDYL 157
            IL + EE    +  +L
Sbjct: 152 GILLKTEERAYHIAHFL 168