Pairwise Alignments

Query, 785 a.a., two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1358 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  163 bits (412), Expect = 7e-44
 Identities = 117/417 (28%), Positives = 198/417 (47%), Gaps = 40/417 (9%)

Query: 249  DITRSNRYRRQLEEANKRAEDLLVAREKLMLAITHDFKAPLGSIMGYTELLSRLTEDERQ 308
            DIT       +L  A + AE    A+   +  ++H+ + P+  ++G  +LL     D  Q
Sbjct: 930  DITERKNAELELINAREVAETATKAKSAFLANMSHELRTPMNGVLGMLQLLDATPLDPEQ 989

Query: 309  RFYLDNMKSSSEHLLKLVSDLLDFHRLDLNKAEVNRIVFNPAQLFEEIRVCFEPLTAAKG 368
            R Y+    ++  +L +L+ DLLD  R++  +  +    F+   L +E+     P    KG
Sbjct: 990  RGYVQVAHAAGSNLTRLLGDLLDLARVESGRLTIREEPFDFNGLTQEVLAVLRPEADRKG 1049

Query: 369  LVLQCHIAPELSEKYISDPLRIQQIVNNLLSNAVKFTQQGKITLTVGYNAS--------- 419
            +VL+      +    + DP RI+Q++ N++ NAVKFT +G + L   +  S         
Sbjct: 1050 IVLEA-ATDGMPGALLGDPQRIRQMLLNIVGNAVKFTDRGHVRLLARFEPSAGPSATAEP 1108

Query: 420  ----------KLTIAVADTGKGMASEDRERIFQEFTRLPGAQGEE--GFGLGLSIVHKLV 467
                       L +AV DTG G+ S+    IF+ FT++  A      G GLGLSIV ++V
Sbjct: 1109 GGQGEPGGQGTLYLAVEDTGIGIPSDMLGNIFEPFTQVEDAVSRRHGGAGLGLSIVRRIV 1168

Query: 468  LLLEGTIDVQSTLGKGSCFTVVLPLFPVGKSIVENKPCGSRIKKPSKDTDVSPEETDAVP 527
             L+EG + + S  G+G+  T+ LP+     + ++  P     +    D           P
Sbjct: 1169 DLMEGEVSMTSEEGRGTTVTLRLPV-----AAMDRLPAQEPTRNGLAD-----------P 1212

Query: 528  AMKVIRVLLIDDDKIQLNLTAAMLKQHNIDAVCCEQLEELIEQLRSSTFDVLLTDIQMPA 587
             ++  R+LL++DD +       ML++   DA+        ++ LR   FD +L D+QMP 
Sbjct: 1213 PVRQGRLLLVEDDHVNRLTVLWMLEKLGYDALAVGDGAAALQALRQGRFDAVLMDVQMPV 1272

Query: 588  INGFDLVKLLR-ASNIPQARNIPVIAVTARS-EMDEKALHEHGFAGCLHKPFTVKEL 642
            ++G      +R A+++P    +PVIA+TA + E D + L   G    + KP  V+ L
Sbjct: 1273 MDGLQATAAIRNATDLPGGAEVPVIALTAYAMEGDRERLLAAGMDDYVEKPVDVQAL 1329



 Score =  120 bits (302), Expect = 4e-31
 Identities = 114/395 (28%), Positives = 192/395 (48%), Gaps = 22/395 (5%)

Query: 266 RAEDLLVAREKLMLAITHDFKAPLGSIMGYTE-LLSRLTEDERQRFYLDNMKSSSEHLLK 324
           RAE+L V + +    I+H+ + PL  ++G  E LL+  +ED+  R  L  M  ++  L +
Sbjct: 187 RAEELDVLKTRFFANISHELRTPLTLLLGPLERLLAETSEDDEHRHSLFTMLRNARLLHQ 246

Query: 325 LVSDLLDFHRLDLNKAEVNRIVFNPAQLFEEIRVCFEPLTAAKGLVLQCHIAPELSEKYI 384
            V D+LD  R+D    +      + + L       F+ L A +G+         L  +  
Sbjct: 247 HVDDMLDLSRVDAGAMQPRHAEADLSALTRTTCAYFDTLAAQRGMHYGVQAPLRLDAQVD 306

Query: 385 SDPLRIQQIVNNLLSNAVKFTQQ-GKITLTVGYNASKLTIAVADTGKGMASEDRERIFQE 443
           +D  R  +I+ NLLSN+ KFT   G +++T+     +  ++V+D G G+ +  R  +F+ 
Sbjct: 307 TDKYR--RILLNLLSNSFKFTPDGGSVSVTLERQGDEALLSVSDDGPGVPAHLRGAVFER 364

Query: 444 FTRL-PGAQG-EEGFGLGLSIVHKLVLLLEGTIDVQSTLGKGSCFTVVLPL-FPVGKSIV 500
           + +   GA+G   G GLGL+IV +   L  GT  V      G+ F V LPL  P G   V
Sbjct: 365 YRQSGEGARGLHGGSGLGLAIVKEFAELHGGTTSVGQGAEGGALFQVRLPLAAPPG---V 421

Query: 501 ENKPCGSRIKKPSKDTDVSPEETDAVPAMKVIR------VLLIDDDKIQLNLTAAMLKQH 554
           E  P  S     S   D     +  VP            VL+++D++  +     +L+ H
Sbjct: 422 EVAPAESVAGSGSFAGDPGWLASGHVPQYAPAAGRDGGLVLVVEDNRDMIAYIVDILRPH 481

Query: 555 NIDAVCCEQLEELIEQLRSSTFDVLLTDIQMPAINGFDLVKLLRASNIPQARNIPVIAVT 614
           +  AV  +  EE + +      D+++ D+ MP ++G  +V+ LR    P   ++PV+ +T
Sbjct: 482 HQVAVAFDG-EEGLRKALDLRPDLIVCDVMMPRVDGQRMVEQLR--RYPGMADVPVLMLT 538

Query: 615 ARSEMDEKALH-EHG-FAGCLHKPFTVKELLVTLN 647
           A+++ DE  +H  HG   G + KPFT   LL +++
Sbjct: 539 AKAD-DELRVHLLHGAVQGYIQKPFTAAGLLASVH 572