Pairwise Alignments

Query, 279 a.a., peptidyl-prolyl cis-trans isomerase, cyclophilin-type (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 215 a.a., peptidyl-prolyl cis-trans isomerase, cyclophilin type (RefSeq) from Shewanella loihica PV-4

 Score = 52.4 bits (124), Expect = 8e-12
 Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 49/177 (27%)

Query: 15  GLTACKTGTKKGGN--------------MDNETLVKIETTLGDIKVKLYNE-TPKHRDNF 59
           GLTAC  G ++G N              M  +    + T+LG++ + + +  TP+   NF
Sbjct: 18  GLTAC--GGEEGSNGAIVNPPVTGPVPEMSIDACFTMITSLGEVGLGIDSRHTPQSAANF 75

Query: 60  IKLAEDGVYEGTLFHRVIKDFMIQAGDPDSKNAPK-GK--MLGAGDVGYTLPAEFVYPKY 116
           I   +DG Y+GTL HRVI +F+IQ G   S   PK GK  +     VG++          
Sbjct: 76  IGYVDDGFYDGTLIHRVIHNFIIQGGGFTSGMVPKPGKAPIKNEASVGFS---------- 125

Query: 117 FHKKG--ALSAARQGDNV----------NPKKE-SSGCQFYIVTGKVYNDSTLLGME 160
            + +G  A++ ARQ D+           NP+ + S+  + Y V G+V     L GME
Sbjct: 126 -NLRGTLAMARARQSDSATSQFFINTLDNPQLDYSASSEGYAVFGRV-----LSGME 176



 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)

Query: 239 YTVFGEVIEGMDIVDKIQQVKT----DRSDRPEEDVKIVKV 275
           Y VFG V+ GM++VD+I  V T    D SD P E++ I ++
Sbjct: 165 YAVFGRVLSGMEVVDQIGIVATTRVGDYSDVPLEEIVIERI 205