Pairwise Alignments

Query, 231 a.a., putative DNA repair protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 225 a.a., DNA repair protein RadC (RefSeq) from Shewanella amazonensis SB2B

 Score =  137 bits (344), Expect = 2e-37
 Identities = 81/225 (36%), Positives = 129/225 (57%), Gaps = 5/225 (2%)

Query: 7   LSINQWALEDRPREKMMEKGAAALSDAELLAILIGSGNTEESAVELMRRLLLSCDN--NL 64
           ++I  W   + PREK++++GAA LSDAELLA+L+ +G + ++AV+L R L+        L
Sbjct: 1   MAIRDWPEGEGPREKLLQRGAAHLSDAELLAVLLRNGVSGQNAVDLARELIGEFGGLRPL 60

Query: 65  NSLAKWEVCDYSRFKGMGPAKSITVMAALELGKRRKLQNIQERPRISCSRDIYDIFQPVM 124
            S  K +VC   R +G+GP K   + A+ EL +R   +++Q    ++      D  +  +
Sbjct: 61  FSATKQQVC---RLQGLGPVKYAQLQASAELARRLAGESLQRGAVLTSPDLTRDYLRFQL 117

Query: 125 CDLEQEEFWVLLLNQATRLIDKVRISTGGIDGTYTDVRTILREALLQRATQIAVVHNHPS 184
            D   E F VLLL+   R+I  V +  G ID      R ++   L +RA  + V HNHPS
Sbjct: 118 ADRAYEVFAVLLLDSQHRVIQFVELFRGTIDAASVYPRELVSLVLEKRAAAVIVCHNHPS 177

Query: 185 GNIQPSQPDRTLTEHIRRAADTMNIRLIDHVIVCEDKFYSFADEG 229
           G  +PSQ DR +TE ++ A  T+++ L+DH++V + +  SFA+ G
Sbjct: 178 GVAEPSQADRRITERLKNALATIDVSLLDHMVVGDREIVSFAERG 222