Pairwise Alignments

Query, 231 a.a., putative DNA repair protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 233 a.a., DNA repair protein RadC (RefSeq) from Shewanella loihica PV-4

 Score =  135 bits (341), Expect = 5e-37
 Identities = 78/223 (34%), Positives = 123/223 (55%), Gaps = 1/223 (0%)

Query: 7   LSINQWALEDRPREKMMEKGAAALSDAELLAILIGSGNTEESAVELMRRLLLSCDNNLNS 66
           ++I  W   + PREK++  G A LSDAELLA+L+ +G   +SAV L R ++L+    L +
Sbjct: 9   MAIKDWPQGEGPREKLLRSGVAQLSDAELLAVLLRNGLKGQSAVSLAR-VMLTHFGGLRA 67

Query: 67  LAKWEVCDYSRFKGMGPAKSITVMAALELGKRRKLQNIQERPRISCSRDIYDIFQPVMCD 126
           L    + +    +G+GP K   + AA+EL KR   +N+Q    +S      D     + D
Sbjct: 68  LFSASLSELCDIQGIGPVKYAQLQAAIELSKRIAQENLQRGKILSDPDLTRDYLMRQLAD 127

Query: 127 LEQEEFWVLLLNQATRLIDKVRISTGGIDGTYTDVRTILREALLQRATQIAVVHNHPSGN 186
              E F +LLL+   R+I  V +  G ID      R ++   L ++A  + V HNHPSG 
Sbjct: 128 RAYEVFAILLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGG 187

Query: 187 IQPSQPDRTLTEHIRRAADTMNIRLIDHVIVCEDKFYSFADEG 229
            +PS  DR +TE ++ A  T+++ L+DH++V + +  SFA+ G
Sbjct: 188 AEPSHADRRITERLKYALATIDVSLLDHMVVGDREIVSFAERG 230