Pairwise Alignments

Query, 1381 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1368 a.a., hybrid sensor histidine kinase/response regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  626 bits (1614), Expect = 0.0
 Identities = 420/1375 (30%), Positives = 696/1375 (50%), Gaps = 94/1375 (6%)

Query: 39   FKQLSAPYSLPTNEVQKVYQDKDGFIWFATRNGLCQYNGYETTLYKSNLYSPDLLTTNSI 98
            F+ +S    L  + V  + QD  GFIW  T++GL +Y+     +Y+     P  + +   
Sbjct: 45   FRNISVEKGLSQSTVFAIKQDTLGFIWIGTQDGLNRYDSKGFKVYRPVKSDPKSVQSYYT 104

Query: 99   TCLVDDNNNHLWIGTSEGLNVMDKRTGEIKKYKAPY-LSNNVVSALCVTRDNTVWV-GTD 156
              L  D+   LW+G ++G++  +  T     YK P  L    VS++     + +W     
Sbjct: 105  RTLFIDHTGSLWVGGNQGVSRYNYATDSFTNYKLPRSLGEWYVSSITEDPQHNIWATSVV 164

Query: 157  NGLCRYVAEKDTFVVCGDDFGDSRLRYVTIKSLLEDSDGDLWIGTWAQ--------GLFR 208
             G+ +  A            G+S+ + V   S        +++G+W Q        GLF+
Sbjct: 165  GGVFKLTA------------GESQFKQVNYDSFNTGIKRVVYVGSWKQNILIGTEVGLFK 212

Query: 209  YSPSTDKVEIYPKINDQYSSHVIYEDSNKDIWVGSWGYGLFKLQNPKDMQRVSYQRFLHE 268
             +   +K+       D+ + + +Y D +   WV + G GL +       ++V    F+H 
Sbjct: 213  MTGPKNKLVKIDLGTDKPAINDVYIDGDV-FWVATEGDGLIQYHFETGEKKV----FMHS 267

Query: 269  NGDDSSLSDNIVYDIAEDINTHTLWVGTRSGLSILKLDEPDAFINYKSGKTDYRIPSDEV 328
             G   S++DN +  + +D + + +W+GT  GL+I  L+       Y      Y I  + V
Sbjct: 268  PGG-KSIADNNIRCVGKDTDGN-IWLGTFKGLTIFDLNTNTLENYYHQISQPYTISQNSV 325

Query: 329  NSIMRDAQRNMWIGAIGGGVLMADTRQSTFALYTLNFGDEDIPVTSVRTLFADSDQNLWI 388
                +D Q  +W+G   GG+         F L + N G   +    V  +  DS  N WI
Sbjct: 326  RCFFKDKQNGIWLGTFYGGINYYHKNDIKFNLLSQNTGRLSLNDEVVSAIKEDSKGNFWI 385

Query: 389  GVGTYGLACREYETGKLKMYSHIPEFSGLKDLPSLFAVTQRKKSGEIWFGMYNGGIYVYR 448
            G    GL      T  +  +S+    +      ++ A+        +  GM+NGG+ +  
Sbjct: 386  GTNDKGLNYWNRATNNISYFSNNENNANSLSANNIKAIAFDNDQN-LLVGMHNGGLNILN 444

Query: 449  KG----EKVKHLTTKNSGFLTSDCVSALYEDYEGNCWVGTRGGIGVRLADGTDYRFETMN 504
                  ++ +H +  +   +  D V  + +DY+   W+GTR G+     D  + + +T  
Sbjct: 445  PNTGNVKRYRH-SENDPNSIAGDLVYGILKDYKNRIWIGTRSGL-----DQFNPQSQTFT 498

Query: 505  FNDSLSAGWIYVRD----IIKDMDSSVWLATSNLGVIHITGDVRQPSTLKYENYSFHNRK 560
                  AG     D    + +D    +W+ T+N GV      +  P  + + N    N +
Sbjct: 499  HIHLDKAGKRPSSDDITYLFEDSKHRIWIGTTN-GVT-----LFYPDNMLFGNDL--NNQ 550

Query: 561  LITNAVLCIHLDRFGRLWAGTEGGGLYLYNRNKGEFEE-KTRAYSIPGDVIVSIEEDKSG 619
            L  + + CI  D+ GR+W G+  G L LY+ N+  F   K R   I G  I  ++ D  G
Sbjct: 551  LRDDVISCITEDKKGRIWIGSREG-LILYDENQQSFVTYKNRKDFIKG-TIYGLQPDNEG 608

Query: 620  NLWLGTISGLVKLYVAAVGNDFSTRIYTSADGLQDN-FIVNSSC-SRNGELFFGGHKGYN 677
            N+W+ T  GL++    A     +++ +   DGLQ+N F   + C + +G L FGG KG +
Sbjct: 609  NIWVSTNRGLIRYNPEAK----TSQAFDETDGLQNNQFNDYAFCKASDGMLLFGGIKGLS 664

Query: 678  SFFPDKMEIPSQETNFLITDIKIFNHSFSNLPVELQQKISPVMPTYTSKIELPHKYNNFS 737
             F+P  ++          T +++FN+S ++     + KI       ++++E   +Y  F+
Sbjct: 665  YFYPSSIKQQPLPLKLTFTGLEVFNNSVTSGD---ETKILENHIDQSTQLEFAAEYKQFT 721

Query: 738  IEFAALTYKNPELNRYAYRLQNFDRDWQYTDADRRFAYYNNLPSGTYTFQLKATNENGEW 797
            I F    Y +    +Y Y+L  FD+DWQ+T+ D +  Y NNL +G+Y F +KA   NGE 
Sbjct: 722  IHFNTFNYISANRTKYLYKLDGFDKDWQHTE-DLKITY-NNLRAGSYNFLIKAVGPNGEA 779

Query: 798  SGYVRELTVVVLPPFWATWWAYLLYVIIVSVIGVSI--YRTAKNRILLRNALRLREIEKA 855
            S  VR L +++ PP++   W YL   + + ++G S   YR    RI   + L+L  I+K 
Sbjct: 780  SA-VRTLKIIISPPWYNATWFYLF--VFIDLVGASYIAYRIIDQRIKALHQLKLERIDKE 836

Query: 856  KAEELNHAKLQFFTNITHELLTPLTIISATVDELKTQAPSHNDLYT----VMNSNIQRLI 911
            K   +N  K+ FFTN++HEL TPLT+I A ++EL  + PS + + T    +M  N +RL 
Sbjct: 837  KVRYINQVKMDFFTNVSHELRTPLTLILAPLEEL-IKKPSTDKVITKRHEMMLINAKRLY 895

Query: 912  RLLQQILEFRKAETGNLKLRVSPGDIAAFVKNAAESFQPLVKKRKIHFSFLCDPESMIGY 971
             L+ Q+ EFRK ETG  KL+VS  DI +F+    ESF+PL  K ++ +++      +  Y
Sbjct: 896  NLVDQLFEFRKTETGTRKLKVSKSDIVSFIHEVYESFKPLSDKNQVQYTYHSSEAKLSFY 955

Query: 972  FDMDKLDKILYNLLSNAAKYNKEDGFIQVSLSYDETDKDFILLKIKDNGKGISKEKQKNL 1031
            FD D ++KIL+NLLSNA KY      I V LS   T  +F ++ + D G GIS++    +
Sbjct: 956  FDNDAMEKILFNLLSNAFKYTGAHNKISVELS---TQDNFAIITVTDTGVGISEDDIAKV 1012

Query: 1032 FKRFYEGDYRKFNTIGTGIGLSLTKDLVELHGGTISVESEVDHGTEFMVRIPIERSYYDE 1091
            F RFY+ + ++ N +G+G+GL+ TK L+ELH G+I  ESE+  G++F V IP+  + Y E
Sbjct: 1013 FDRFYQVNNQEMN-LGSGVGLAFTKRLIELHHGSIKAESELGRGSKFTVSIPMADAVYQE 1071

Query: 1092 E----------QIDDEAISLMQNPVNYEDTQEDADVETQEVTIKANTILLVEDNGELLHL 1141
            +           I  E  ++ +N + Y D  +   +   E   + + +LLV+DN E+L  
Sbjct: 1072 DVKTENMRYELSIVPEEEAIAENNLMYAD--QSLTIGLNENDGQRSKLLLVDDNKEILDY 1129

Query: 1142 MTKLLSREYNVFTAQNGKEGIAVLEKEDVDLIVSDVMMPEMDGIEFCKYVKGHLEMSHIP 1201
            +       Y +  A +GK  + +LE E  DLIVSDVMMPE+DG+ FCK +K ++  SHIP
Sbjct: 1130 LQDYFKESYEITIAFDGKMALDILENEQFDLIVSDVMMPELDGLHFCKRLKQNINTSHIP 1189

Query: 1202 MILLTAKNKEEDRAEAYEIGADAFISKPFNLTVLHARIRNLLKYKERMARDFKNQIVFEV 1261
            +ILLTAK +   + +  E+GAD +I+KPF++ +L A+I +LLK ++R+   +        
Sbjct: 1190 VILLTAKTEVNQQIKGLEMGADDYITKPFSVEMLGAKIASLLKSRKRLKEYYGGSKEVVP 1249

Query: 1262 KDLNYTSLDEDFIQRAIHCVNNHLEDPNFDQAQFADEMRTSKSTLYKKLKSLAGLNTSSF 1321
            ++L + +LDE+F++ AI  V  +L D +F   +F+ E+  S+S LY K K++ G + + F
Sbjct: 1250 QNLAFNTLDEEFLKEAIAIVEKYLADSDFSVDKFSREIGMSRSNLYLKFKAITGESATDF 1309

Query: 1322 IRNVRLKAACRIMEEKGTNVRVSELAYAVGFNDPKYFSSCFKKEFDMLPSEYIER 1376
            I+ +R   A  +M+ K     ++++ Y  GFN P YFS+ FK+ +  +PSEY+ R
Sbjct: 1310 IKRIRFSKAVELMQSK--RYTIAQITYMCGFNSPSYFSTAFKQYYGCMPSEYLAR 1362