Pairwise Alignments

Query, 1381 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1365 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  620 bits (1598), Expect = 0.0
 Identities = 429/1381 (31%), Positives = 699/1381 (50%), Gaps = 90/1381 (6%)

Query: 36   NLKFKQLSAPYSLPTNEVQKVYQDKDGFIWFATRNGLCQYNGYETTLYKSNLYSPDLLTT 95
            +L F  L     L  N V  + QDK+ FIW  TR+GL +Y+GY   +Y ++  + + L+ 
Sbjct: 25   HLVFNHLRMENGLSQNSVMAITQDKNQFIWMGTRHGLNRYDGYRFKIYNNSSDNLNSLSD 84

Query: 96   NSITCLVDDNNNHLWIGTSEGLNVMDKRTGEI----KKYKAPYLSNNVVSALCVTRDNTV 151
            N I  L+ D+   LW+GT  GLN+ + +        K+  A   S + V  +       +
Sbjct: 85   NVINTLLSDSKGRLWVGTENGLNIYNDKNDHFYRINKRSSANSFSCDSVECIYEDPQKNI 144

Query: 152  WVGTDNGLCRYV-AEKDTFVVCGDDFGDSRLRYVTIKSLLEDSDGDLWIGTWAQGLFRYS 210
            WVGT NGL   +  EK  F     D  + +     I S+ +D   +LW+GT+  GL R  
Sbjct: 145  WVGTYNGLNLVIDTEKQIFKKFLFDKPNYKSALNCIFSIFKDEKQNLWVGTY-NGLVRIY 203

Query: 211  PSTDKV--EIY---PKINDQYSSHVIYE---DSNKDIWVGSW-GYGLFKLQNPKDMQRVS 261
                K   EI+   P   +  SS+ +     D  K +W+G++ G  LF      D +  +
Sbjct: 204  QVKGKYHFEIFRHNPNNKNSISSNAVKSIVIDKQKRLWLGTYNGLNLF------DYEHKT 257

Query: 262  YQRFLHENGDDSSLSDNIVYDIAEDINTHTLWVGTRSGLSILKLDEPDA--FINYK-SGK 318
            ++R+     D +S+ +N +  +  D     +W+GT+ GLSIL   +P+   F NY+   +
Sbjct: 258  FKRYQTSATDPNSIINNDIRKLTRD-KVGNIWIGTQEGLSIL---DPNTRKFSNYRYDPE 313

Query: 319  TDYRIPSDEVNSIMRDAQRNMWIGAIGGGVLMADTRQSTFALYTLNFGDEDIPVTSVRTL 378
                +  + ++SI +D   ++++G    G  +     + F ++  +   + +    V  +
Sbjct: 314  QPDGLSQNSIHSIFQDLNGSVYLGTYYKGANVVYPSATPFTVFRNSKTRQGLSSDIVSAM 373

Query: 379  FADSDQNLWIGVGTYGLACREYETGKLKMYSHIPEFS-GLKDLPSLFAVTQRKKSGEIWF 437
              D + NLWIG    GL            Y   P  + GL    +L       K+G++  
Sbjct: 374  VEDQNHNLWIGTEGGGLNYVNRSNHTFTYYKLEPNSNNGLNS--NLIKTLCLDKTGQLLV 431

Query: 438  GMYNGGIYVYRKG----EKVKHLTTKNSGFLTSDCVSALYEDYEGNCWVGTRGGIGVRLA 493
            G + GG+Y++       +K+ ++  K +    S+ + A+ ED +G  WVG+R G+     
Sbjct: 432  GTHRGGLYLFNAAGHNFKKIINVKNKKNNPGGSEVI-AITEDSDGTVWVGSRDGLSTLKK 490

Query: 494  DGTDYRFETMNFNDSLSAGWIYVRDIIKDMDSSVWLAT-SNLGVIHITGDVRQPSTLKYE 552
                Y   T+      +    Y++ I +D   ++W+ T + L   H       P+T +  
Sbjct: 491  TNGLYAATTVKSPLEQNLRNKYIQVIFEDKAKNLWIGTMAGLYAYH-------PATKRIT 543

Query: 553  NYSFHNRK---LITNAVLCIHLDRFGRLWAGTEGGGLYLYNRNKGEFEEKTRAYSIPGDV 609
             Y  +  K   L ++ + CI   + G +  GT  GGL +++    +F+       +P   
Sbjct: 544  AYYKNKTKPGSLNSDHINCIVQIQNGNICVGTSFGGLSIFDNKSRKFKNYNEKDGLPNSN 603

Query: 610  IVSIEEDKSGNLWLGTISGLVKLYVAAVGNDFSTRIYTSADGLQDN-FIVNSSCSRN-GE 667
            ++ I ED+  NLW+ T  GL KL +   G   +   YT +DGL  N F + S    + GE
Sbjct: 604  VLGIIEDEENNLWISTDKGLSKL-ITKTGRFIN---YTKSDGLAGNDFNIRSFLKDSRGE 659

Query: 668  LFFGGHKGYNSFFPDKMEIPSQET--NFLITDIKIFNHSFS-NLPVELQQKISPVMPTYT 724
            LFFGG+ G  +F+P +++I S         T++K+F+   + N P  L  +    +   T
Sbjct: 660  LFFGGYDGLTAFYPSQIDINSNRNVAPITFTELKLFDKPVAVNAPDGLLNEDIKSIKQIT 719

Query: 725  SKIELPHKYNNFSIEFAALTYKNPELNRYAYRLQNFDRDWQYTDADRRFAYYNNLPSGTY 784
             K    H  NNFS++FA L Y  PE N Y Y L+   +DW  TD       Y++LP+G Y
Sbjct: 720  FK----HDNNNFSLDFALLNYIKPEKNSYRYILKGHSKDWVKTDVPS--VTYSDLPAGNY 773

Query: 785  TFQLKATNENGEWSGYVRELTVVVLPPFWATWWAYLLYVIIVSVIGVSIYRTAKNRILLR 844
            TF +   N +G        L + VLPPFWATWWAYL+Y+   S +   I R    R LL+
Sbjct: 774  TFIVTGNNNDGNPGNKPASLKITVLPPFWATWWAYLIYLACFSGLLFLIVRYLFVRALLK 833

Query: 845  NALRLREIEKAKAEELNHAKLQFFTNITHELLTPLTIISATVDELKTQAPSHNDL---YT 901
                       + E++   KL FFT + HE+ TPLT+I   ++ L  Q  +  +L     
Sbjct: 834  -----------RTEDIQKMKLNFFTYVAHEIRTPLTLILGPLENLSKQYQTDTELNRQII 882

Query: 902  VMNSNIQRLIRLLQQILEFRKAETGNLKLRVSPGDIAAFVKNAAESFQPLVKKRKIHFSF 961
             + +N  RL+RL+ ++++FRKAETG+L L V+  +I  F+     SF  L +   I + F
Sbjct: 883  PIKNNANRLMRLITELMDFRKAETGHLTLHVTEDNIVDFINEIFISFSHLAQTNDIQYEF 942

Query: 962  LCDPESMIGYFDMDKLDKILYNLLSNAAKYNKEDGFIQVSLSYDETDKDFILLKIKDNGK 1021
            +   E++  +FD  +L+K+L+NLLSNA K+  + G I V+L   + +   + + I DNG 
Sbjct: 943  VRGQENISLFFDKRQLEKVLFNLLSNAFKFCDKGGKISVTLVDMDNE---VAISIADNGL 999

Query: 1022 GISKEKQKNLFKRFYEGDYRKFNTIGTGIGLSLTKDLVELHGGTISVESE-VDHG----T 1076
            GI  E  KNLF  +++ D +  N IG+GIGL+L+K +VE H G I+VES   ++G    T
Sbjct: 1000 GIPAESLKNLFSDYFQVDEQHSNQIGSGIGLALSKAIVEEHKGHIAVESTPAENGERGFT 1059

Query: 1077 EFMVRIPIERSYYDEEQIDDEAISLMQNPVNY-EDTQEDADV--ETQEVTIKANTILLVE 1133
             F VR+   +S++ +  I D A     +P  Y +  +++ ++    +E  +   TIL+VE
Sbjct: 1060 NFTVRLKKGKSHF-KTAIFDGAKDYPTHPNIYTQQPEKELNILKPEKETDLSTETILVVE 1118

Query: 1134 DNGELLHLMTKLLSREYNVFTAQNGKEGIAVLEKEDVDLIVSDVMMPEMDGIEFCKYVKG 1193
            DN E+  L+  L+   Y V  ++NG  G     +   DLI+ D+MMP MDGIE C+ +K 
Sbjct: 1119 DNSEIRQLIASLIGGHYLVAESENGLMGWETAVETLPDLIICDIMMPIMDGIELCRRLKE 1178

Query: 1194 HLEMSHIPMILLTAKNKEEDRAEAYEIGADAFISKPFNLTVLHARIRNLLKYKERMARDF 1253
                SHIP+I+LTA++    +    E GADA+I+KPF+  +L   +RNLL  ++ M + F
Sbjct: 1179 DERTSHIPVIILTARSSHIHQVSGLETGADAYITKPFSPELLLLNVRNLLMSRQVMRQKF 1238

Query: 1254 KNQIVFEVKDLNYTSLDEDFIQRAIHCVNNHLEDPNFDQAQFADEMRTSKSTLYKKLKSL 1313
               I  + K+L   ++DE F+ + +  ++ H+ D +F  ++ A  +  S+  LYKK+++L
Sbjct: 1239 LKHIHLQPKELTINAIDEAFMLKLLKYIDEHITDEDFGVSELASMVGMSRPVLYKKIRNL 1298

Query: 1314 AGLNTSSFIRNVRLKAACRIMEEKGTNVRVSELAYAVGFNDPKYFSSCFKKEFDMLPSEY 1373
              L+ + F++++RLK A  +   K     + E+AY VGFNDPKYFS  FKK+F   P  +
Sbjct: 1299 TNLSVNDFVKSIRLKKAMELF--KQNRFTIYEVAYQVGFNDPKYFSREFKKQFGKSPRAF 1356

Query: 1374 I 1374
            +
Sbjct: 1357 M 1357