Pairwise Alignments

Query, 1381 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1349 a.a., hybrid sensor histidine kinase/response regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  658 bits (1697), Expect = 0.0
 Identities = 441/1382 (31%), Positives = 711/1382 (51%), Gaps = 76/1382 (5%)

Query: 33   VIYNLKFKQLSAPYSLPTNEVQKVYQDKDGFIWFATRNGLCQYNGYETTLYKSNLYSPDL 92
            V   L F  LS    L  + V  + +D  G++WF TR+ L +Y+G    +Y+++  +P  
Sbjct: 4    VFGQLSFDHLSVNNGLSQSTVLSICKDSRGYMWFGTRDCLNRYDGKSVKIYRTDPDNPAS 63

Query: 93   LTTNS-ITCLVDDNNNHLWIGTSEGLN--VMDKRTGEIKKY---KAPYLSNNVVSALCVT 146
            ++T   I  L +D   +LWIGT  GLN  + +K   E   +    A  +S+ ++ ++   
Sbjct: 64   ISTEDYIYALEEDRQKNLWIGTQNGLNRYIPEKDAFERIAFDPKNANSISDKIILSIYAD 123

Query: 147  RDNTVWVGTDNGLCRYVAEKDTFVVCGDDFGDSRLRYVTIKSLLEDSDGDLWIGTWAQGL 206
            R   VW GT+ GL   + E  +       +    L   ++ ++ EDS G++W+GT   GL
Sbjct: 124  RSGKVWFGTNQGLS--MLENGSSRKFKKIYQKDGLAGNSVYTIFEDSKGNIWVGT-TTGL 180

Query: 207  FRYSPSTDKVEI---YPKINDQ-----YSSHVIYEDSNKDIWVGSWGYGLFKLQNPKDMQ 258
             R S    K  I   Y +  D       S   I ED    IW+GS   GL    N    Q
Sbjct: 181  SRLSFKEGKYHIQSFYHRAGDPGSISGNSIRTIAEDGKGRIWIGSESEGL----NLFLPQ 236

Query: 259  RVSYQRFLHENGDDSSLSDNIVYDIAEDINTHTLWVGTRSGLSILKLDEPDAFINYKSGK 318
              S++RF +     ++LS++IV  I  D     LW+ T +GL+IL   +   F +YK   
Sbjct: 237  SHSFKRFRYSALQPNALSNDIVRKIMPD-GKGNLWIATMNGLNILDT-QTLGFTSYKHDA 294

Query: 319  TDYRIPSDE-VNSIMRDAQRNMWIGAIGGGVLMADTRQSTFALYTLNFGDEDIPVTSVRT 377
             + +  SD  +  I +D Q ++WIG + GGV +A      F ++  +     I       
Sbjct: 295  DNRKSLSDNSIKEIFQDDQGSIWIGTMFGGVNVAHRNTIPFTVFKYSKYRNSISSDISSV 354

Query: 378  LFADSDQNLWIGVGTYGLACREYETGKLKMYSHIPEFSGLKDLPSLFAVTQRKKSGEIWF 437
            + AD+DQNLWIG    GL     +TG  K Y + P   G     ++ A+   +K G IW 
Sbjct: 355  IAADNDQNLWIGTEGQGLNFYNVKTGLFKKYINDPRDPGSLSNNTIKAIFNDRK-GRIWI 413

Query: 438  GMYNGGIYVYRKGE-KVKHLTTKNSGFLTSDCVSALYEDYEGNCWVGTRGGIGVRLADGT 496
            G+Y GG+ ++     K KH     +G L+   +S++ ED +G   +GT    G+ + D  
Sbjct: 414  GLYQGGLELFIPSTGKFKHYPPGRNG-LSQGYLSSISEDDQGRLLLGTSSK-GLNIFDPE 471

Query: 497  DYRFETMNFNDS--LSAGWIYVRDIIKDMDSSVWLATSNLGVIHITGDVRQPSTLKYENY 554
               F+ ++      L     Y+R   +D   ++W+ T   G+  +       S    ++ 
Sbjct: 472  KESFQLIDDQPGHGLKLSSSYIRFAYQDTKKNLWVGTPR-GLNFLPPGANHFSVFSRDDK 530

Query: 555  SFHNRKLITNAVLCIHLDRFGRLWAGTEGGGLYLYNRNKGEFEEKTRAYSIPGDVIVSIE 614
            +  + K  ++ + C+  DR G +W GT  GGL LY+ +   F   TRA  +  D I+ + 
Sbjct: 531  TKGSLK--SSQITCLWEDRLGHIWVGTMRGGLSLYHPDSKSFSTYTRAQGLASDNIIDVL 588

Query: 615  EDKSGNLWLGTISGLVKL-YVAAVGNDFSTRIYTSADGLQDN-FIVNSSCSR-NGELFFG 671
            +D  GNLW+ T  GL K  Y   V  +++T      DGL  N F VNS+    +G+L+FG
Sbjct: 589  DDNDGNLWISTDRGLSKFDYKRGVFKNYNT-----GDGLPTNEFNVNSAYRDIHGKLYFG 643

Query: 672  GHKGYNSFFPDKMEIPSQETNFLITDIKIFNHSFSNLPVELQQKISPVMP--TYTSKIEL 729
             + G   F P ++   +     + + +K+FN      PV + +    +    ++T  I  
Sbjct: 644  SYDGLVVFTPREITENTLIPRTVFSGLKLFNK-----PVGINEDNGLLKQDISFTKGITF 698

Query: 730  PHKYNNFSIEFAALTYKNPELNRYAYRLQNFDRDWQYTDADRRFAYYNNLPSGTYTFQLK 789
              + N FS+EF +L Y  P+ NRYAY+L+ F++DW Y       A Y NLPSG Y   +K
Sbjct: 699  TAEQNIFSLEFVSLNYVQPQRNRYAYKLEGFEKDWNYVTIPS--ASYTNLPSGNYKLLVK 756

Query: 790  ATNENGEWSGYVRELTVVVLPPFWATWWAYLLYVIIVSVIGVSIYRTAKNRILLRNALRL 849
             +N +G WS     + + VLPP W TWWAY LY I   ++   + R  + +  L+  L  
Sbjct: 757  GSNNDGLWSKAPVVMEIRVLPPLWQTWWAYTLYFIAGGLLLYFVLRFTRRQQKLKTELYY 816

Query: 850  REIEKAKAEELNHAKLQFFTNITHELLTPLTIISATVDELKTQAPSHNDLYTVMNSNIQR 909
              +   +  EL   KL FFT I+HE+ TPLT+I A +++L  +  + N    +   NI+R
Sbjct: 817  EHLNSERQSELYQMKLDFFTRISHEIRTPLTLIFAPLEKL-IKITAENGAVNLQLQNIKR 875

Query: 910  ----LIRLLQQILEFRKAETGNLKLRVSPGDIAAFVKNAAESFQPLVKKRKIHFSFLCDP 965
                L+RL+ ++L+FRK E+GNL L+VS  D+ +F +   ES+  L + + I + F C+ 
Sbjct: 876  NTDRLVRLISELLDFRKIESGNLSLKVSENDLVSFCRQIYESYLGLAEIKNIDYRFECEA 935

Query: 966  ESMIGYFDMDKLDKILYNLLSNAAKYNKEDGFIQVSLSYDETDKDFILLKIKDNGKGISK 1025
            ESM+ Y+D  +++K+ YN+LSNA K+  ++G I  SL   +       + I D G GI  
Sbjct: 936  ESMLVYYDPAQMEKVFYNILSNAFKFTPDNGKITFSLKQSD---GLAKIAITDTGIGIPA 992

Query: 1026 EKQKNLFKRFYEGDYRKFNTIGTGIGLSLTKDLVELHGGTISVESEVDHG-----TEFMV 1080
            + Q  +F  F++       T G GIGL+L K++++LH G ++V SE  +      T   V
Sbjct: 993  DLQDKIFTNFFQVKNGAAATEGWGIGLALAKNILDLHKGEVNVYSEPANNKRQGITILHV 1052

Query: 1081 RIPIERSYYDEEQIDDEAISLMQNPVNYEDTQEDADVETQEVTI------KANTILLVED 1134
             + + ++++ +EQI    I +   PV         D E  ++ +      K +T+L+VED
Sbjct: 1053 SLLLGKNHFSDEQIASNPI-VTDKPV----AVGSLDHELAKIQLVAPEDKKRHTVLVVED 1107

Query: 1135 NGELLHLMTKLLSREYNVFTAQNGKEGIAVLEKEDVDLIVSDVMMPEMDGIEFCKYVKGH 1194
            N EL   + + L   Y++   +NG  G  V  +   D++VSDV MPE++G E C+ +K  
Sbjct: 1108 NDELRDFIVQSLKHTYHILEGKNGLVGWEVATEHVPDIVVSDVTMPELNGFELCQRLKQE 1167

Query: 1195 LEMSHIPMILLTAKNKEEDRAEAYEIGADAFISKPFNLTVLHARIRNLLKYKERMARDFK 1254
               +HIP+I+LTA      + +  E GAD +I+KPF++ VL   IRNLL+ +E + + + 
Sbjct: 1168 ETTNHIPVIMLTAMASHVHQIDGLEAGADVYITKPFSIQVLELSIRNLLQGREELRQKYI 1227

Query: 1255 NQIVFEVKDLNYTSLDEDFIQRAIHCVNNHLEDPNFDQAQFADEMRTSKSTLYKKLKSLA 1314
             QI+   + L   S +E F+ R +  + + +EDP F+     D++  S++ LYKK+K+L 
Sbjct: 1228 KQIMLNPRKLETASPEEKFLNRLMQLIEDGMEDPEFNVGGLVDQIGMSQTVLYKKIKALT 1287

Query: 1315 GLNTSSFIRNVRLKAACRIMEEKGTNVRVSELAYAVGFNDPKYFSSCFKKEFDMLPSEYI 1374
            GL+ S FI++ RLK A +++ +   N  ++E+AY+VGFND KYFS  F+K+F + PSEY 
Sbjct: 1288 GLSISDFIKSQRLKRAAQLLNDHKMN--IAEVAYSVGFNDRKYFSKEFRKQFGVAPSEYQ 1345

Query: 1375 ER 1376
            ++
Sbjct: 1346 QK 1347