Pairwise Alignments

Query, 1381 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1374 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  555 bits (1431), Expect = e-162
 Identities = 399/1404 (28%), Positives = 662/1404 (47%), Gaps = 95/1404 (6%)

Query: 13   LSFLILFLLLKSALLLATEDVIYNLKF--KQLSAPYSLPTNEVQKVYQDKDGFIWFATRN 70
            L F +LF  +K+  L      +    +  K       LP+       +DK GFIW  T N
Sbjct: 11   LHFFLLFTHVKAQELRTNNQPVLTGHYVIKTYGINEGLPSKSTTAALKDKRGFIWVGTEN 70

Query: 71   GLCQYNGYETTLYKSNLYSPDLLTTNSITCLVDDNNNHLWIGTSEGLNVMDKRTGEIKKY 130
            GLC+++GY   +Y +       LT N I  +V+D N   W+GT  GLN  D  T + +++
Sbjct: 71   GLCKFDGYAFKIYVNITGDTTSLTNNYINAVVEDKNGVFWVGTMNGLNKFDPVTEKFERF 130

Query: 131  -----KAPYLSNNVVSALCVTRDNTVWVGTDNGLCRYVAEKDTFVVCGDDFGD-SRLRYV 184
                     LSNN + +L + R N +WVGTD+G   +    + F V   DF D   ++  
Sbjct: 131  YHKENNRTSLSNNKIWSLLIDRTNKLWVGTDDGFNLFNKNSNAFTVYQPDFKDPDAIKGK 190

Query: 185  TIKSLLEDSDGDLWIGTWAQGLFRYSPSTDKVEIYPK--INDQYSSHVIYE---DSNKDI 239
            ++ ++ ED  G+LW+G W++GL ++   T   + Y +  +  + + + I+    D++  I
Sbjct: 191  SVNAIAEDKAGNLWLGNWSKGLNKFDKKTKSFKNYTQKEVAGEKNPNDIWTLCLDADGMI 250

Query: 240  WVGS-WGYGLFKLQNPKDMQRVSYQRFLHENGDDSSLSDNIVYDIAEDINTHTLWVGTRS 298
            W+GS W   LF+  +PK     +Y      N    S+ +     +    +    WV T+ 
Sbjct: 251  WIGSYWKGDLFRF-DPKSESFTTYASKGTGNASIFSVLNLGTEKLLVGGSAGVFWVNTKL 309

Query: 299  GLSILKLDEPDAFINYKSGKTDYRIPSDEVNSIMRDAQRNMWIGAIGGGVLMADTRQSTF 358
                 K++E + F N                 + RD    +WI     G    D  Q  F
Sbjct: 310  N-KWEKIEELEFFAN---------------GGLYRDKSGMIWICG-KNGFSKIDFNQYKF 352

Query: 359  ALYTLNFGDEDIPVTSVRTLFADSDQNLWIGVGTYGLACREYETGKLKMYSHIPEFSGLK 418
               +L FG  +I             ++ W+G    GL     +   +    H    + L 
Sbjct: 353  NFISLPFGQAEIKS------IISYGKDFWVGTNK-GLFKYNPDNHAVSKLQHTGNPNSLS 405

Query: 419  DLPSLFAVTQRKKSGEIWFGMYNGGIYVYRKGEKVKHLTTKNS--GFLTSDCVSALYEDY 476
                +   T  K    +W    NG      K  K  H   +++   F   D    L E  
Sbjct: 406  SSEIINLSTDLKN--RLWVMGENGFDRYDEKANKFIHHHHRSALGSFFNEDVFRDLIEVN 463

Query: 477  EGNCWVGTRGGIGVRLADGTDYRFETMNFND-----SLSAGWIYVRDIIKDMDSSVWLAT 531
                ++ T  G+ V       Y   T  FND     SLS   +Y   ++KD   +VW+ T
Sbjct: 464  ADEYYLATDAGLKVYNDKTNSY---THYFNDPKNQASLSNNHLYC--LLKDAQGNVWIGT 518

Query: 532  SNLGVIHITGDVRQPSTLKYENYSFHNRK---LITNAVLCIHLDRFGRLWAGTEGGGLYL 588
               G+         P T K+ NY  +N K   +  N V  ++LD    +W  T  G L  
Sbjct: 519  YGSGLSRFN-----PKTRKFSNYMINNSKRGGISNNIVNSLYLDSHQNVWVCTRDG-LNK 572

Query: 589  YNRNKGEFEEKTRAYSIPGDVIVSIEEDKSGNLWLGTISGLVKLYVAAVGNDFSTRIYTS 648
            Y      FE  ++      +V   + ED +G LW+ T  G+      +       + Y  
Sbjct: 573  YIAKTNTFEIYSKQNGFASNVFTDLVEDNNGRLWVTTEQGISLFDPVSK----MVKNYDE 628

Query: 649  ADGLQDNFIVNSSCSRNGELFFGGHKGYNSFFPDKMEIPSQETNFLITDIKIFNHSFSNL 708
             DG+  N  +  +    GE++  G KG   F P  ++          +D  IFN      
Sbjct: 629  KDGVYANAAICKNAK--GEIYLAGSKGIVYFNPQLLKYNKTAPAVYFSDFSIFNKLI--- 683

Query: 709  PVELQQKISPV-MPTY-TSKIELPHKYNNFSIEFAALTYKNPELNRYAYRLQNFDRDWQY 766
               L    SP+ +P Y T +I LP+  +  S  F AL Y   E N+YAY L+ FD+ W Y
Sbjct: 684  ---LPGDDSPLKLPVYMTREITLPYSQSVLSFGFVALNYTLSEKNKYAYFLEGFDKKWNY 740

Query: 767  TDADRRFAYYNNLPSGTYTFQLKATNENGEWSGYVRELTVVVLPPFWATWWAYLLYVIIV 826
            + ++ +  Y  NL  G Y  +++A+N +G W+     + + + PP++ TWWA+ +Y +  
Sbjct: 741  SGSEHKVTY-TNLNPGKYVLKVRASNNDGIWNMEGNSIGITITPPWYRTWWAFCIYGLTF 799

Query: 827  SVIGVSIYRTAKNRILLRNALRLREIEKAKAEELNHAKLQFFTNITHELLTPLTIISATV 886
              +  +  +  ++R  L   ++L  +E  K +EL+  KL FFTN++HE  TPLT+I   V
Sbjct: 800  FGMIYAYLKYREHRANLEFQVKLAHVESEKEKELSEKKLSFFTNVSHEFRTPLTLIINPV 859

Query: 887  DELKTQAPSHNDL--YTVMNSNIQRLIRLLQQILEFRKAETGNLKLRVSPGDIAAFVKNA 944
             EL  +   + D     ++  N +RL+ L+ Q+L FRKA+T   KL+V+P ++ +  K  
Sbjct: 860  KELLYKNDKNVDTTDLNIVYRNAKRLLSLVDQLLLFRKADTYGEKLKVAPVNLVSLCKEV 919

Query: 945  AESFQPLVKKRKIHFSFLCDPESMIGYFDMDKLDKILYNLLSNAAKYNKEDGFIQVSLSY 1004
               F    + + I   F+   E +  Y D +K++ + +NLLSNA K+  E G +++ +  
Sbjct: 920  FLCFVHQARSKNIVLDFIGTDEVIPFYADREKIEIVFFNLLSNAIKFTPEGGTVKMIVGN 979

Query: 1005 DETDKDFILLKIKDNGKGISKEKQKNLFKRFYEGDYRKFNTIGTGIGLSLTKDLVELHGG 1064
               D   I + I+D G GI+    + L+++FY+    K    G GIGL L K+ +E+HGG
Sbjct: 980  RGED---IQVGIEDTGCGITTVAGEKLYEKFYQDPGNKSAKGGFGIGLYLAKNFIEMHGG 1036

Query: 1065 TISVESEVDHGTEFMVRIPIERSYYDEEQIDDEAI---------SLMQNPVNYEDTQEDA 1115
            TI+  S  + GT F + +    S++ +  I  EA+          L+++ +      E A
Sbjct: 1037 TINYTSTENKGTIFNISLRRGISHFKDAVILQEALVDTDSSLFKELIEDEITANKIVEAA 1096

Query: 1116 D--VETQEVTIKANTILLVEDNGELLHLMTKLLSREYNVFTAQNGKEGIAVLEKEDVDLI 1173
            +  +   ++ +   T+L+++DN E+   + ++   +Y+++ A NG++G  ++++   D++
Sbjct: 1097 EEPLIDSQLALDLKTLLIIDDNIEIREYLKQVFRMDYHLYEAGNGEDGYDMVKELLPDIV 1156

Query: 1174 VSDVMMPEMDGIEFCKYVKGHLEMSHIPMILLTAKNKEEDRAEAYEIGADAFISKPFNLT 1233
            + DVMM  + GIE C  +K  + +SHIP+ILLTA +  E + +  E GAD +ISKPF+  
Sbjct: 1157 ICDVMMDGITGIELCSKIKEDVAVSHIPIILLTAISAPEVKLKGIEGGADDYISKPFDKD 1216

Query: 1234 VLHARIRNLLKYKERMARDFKNQIVFEVKDLNYTSLDEDFIQRAIHCVNNHLEDPNFDQA 1293
             L AR+ ++LK K  + R F N+I     +   ++  ++F+   I  V  HL DP+F+  
Sbjct: 1217 FLKARVASILKSKNALQRYFYNEITLNSNNTKISAEYKEFLDHCIRIVEEHLIDPDFNID 1276

Query: 1294 QFADEMRTSKSTLYKKLKSLAGLNTSSFIRNVRLKAACRIMEEKGTNVRVSELAYAVGFN 1353
                 +  S+S LY+K+KS++G + + FIR +RL+ A  I     T+  + E +Y VG N
Sbjct: 1277 TLTATIGMSRSNLYRKIKSISGQSANGFIRFIRLRKAAEIF--INTDKTIQETSYMVGIN 1334

Query: 1354 DPKYFSSCFKKEFDMLPSEYIERF 1377
            DPKYF   F + F+M PS+YI++F
Sbjct: 1335 DPKYFREQFYRLFNMNPSQYIKKF 1358