Pairwise Alignments
Query, 1381 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Subject, 1373 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5
Score = 626 bits (1615), Expect = 0.0
Identities = 439/1387 (31%), Positives = 688/1387 (49%), Gaps = 115/1387 (8%)
Query: 39 FKQLSAPYSLPTNEVQKVYQDKDGFIWFATRNGLCQYNGYETTLYKSNLYSPDLLTTNS- 97
FK L+ L + V + QD GFIWF TR GL +Y+ +Y + L+ S
Sbjct: 48 FKHLNVENGLTQSSVLSIAQDARGFIWFGTRFGLNKYDSKSFKVYYHEENNEKSLSNASF 107
Query: 98 ITCLVDDNNNHLWIGTSEGLNVMDKRTGEIKKY----KAPY-LSNNVVSALCVTRDNTVW 152
++ ++ + L IGTS GLN ++ Y K P +SN +S + + N VW
Sbjct: 108 LSSILALKDGTLLIGTSNGLNKYNEGDDNFDHYVHNSKDPNSISNAGISCIFQDKKNRVW 167
Query: 153 VGTDNGLCRYVAEKDTFVVCGDDFGDSRLRYVTIKSLLEDSDGDLWIGTWAQGLFRYSPS 212
+GT NGL ++ + F D + + I ++ ED +G LW+ T GL
Sbjct: 168 IGTTNGL-NLLSTNGKYKF--KRFLDKQKQRQQIYAITEDHNGTLWLST-TYGLVNMRFK 223
Query: 213 TDKVEIY------PKINDQYSSHV--IYEDSNKDIWVGSWGYGLFKLQNPKDMQRVSYQR 264
K+ + ++N +H+ + ED ++W+G+ G+ KL N SYQ
Sbjct: 224 DGKIHLRYFKDFSEELNKAIDNHITTMVEDRENNLWIGTKQTGVSKL-NLSTETITSYQ- 281
Query: 265 FLHENGDDSSLSDNIVYDIAEDINTHTLWVGTRSGLSILKLDEPDAFINYKSGKTDYRIP 324
+ + + + +S N V I D LW+GT G++I + + + +
Sbjct: 282 --YSSLNPAGISSNNVRKIMMD-QEGKLWIGTLHGINIYNPATKNFSSLHNIPEDPTSLS 338
Query: 325 SDEVNSIMRDAQRNMWIGAIGGGVLMADTRQSTFALYTLNFGDEDIPVTSVRTLFADSDQ 384
+ V I +D Q +W+G G + M + F +Y + V ++ D Q
Sbjct: 339 QNSVYDIYQDRQGIIWVGTYYGAINMVYPNYTPFKVYRSTTAPNGLSSNVVSSIMEDQHQ 398
Query: 385 NLWIGVGTYGLACREYETGKLKMYSHIPEFSGLKDLPS-LFAVTQRKKSGEIWFGMYNGG 443
NLWIG GL + + Y + P + K L + L R K IW G + GG
Sbjct: 399 NLWIGTEGEGLNYYDRKNDTFTRYKNNP--NDPKSLSANLVKSVIRDKKNRIWVGTHYGG 456
Query: 444 IYVYRKGEK--VKHLTTKN-SGFLTSDCVSALYEDYEGNCWVGTRGGIGVRLADGTDYRF 500
+ +++ K V++ KN + +++D ++AL+ED G WVGT GG+ + T +F
Sbjct: 457 LNLFQPETKTFVRYTKHKNDTSSISNDEITALFEDSYGRFWVGTNGGLNS--FNSTTGKF 514
Query: 501 ETMNFNDSLSAGWIYVRDIIKDMDSSVWLATSNLGVIHITGDVRQ--------PSTLKYE 552
N A V I +D +W+AT N G+ + D ++ P LKY
Sbjct: 515 IRNRVNGLTDA----VHYIFEDAKRCLWVAT-NSGLYQLKKDSQRFISRVAADPEILKY- 568
Query: 553 NYSFHNRKLITNAVLCIHLDRFGRLWAGTEGGGLYLYNRNKGEFEEKTRAYSIPGDVIVS 612
N + C+ D+ G L GT GL+ N + + T +P + I+
Sbjct: 569 -----------NEITCLTTDKAGYLLMGTSHNGLFRLNPGRHSYSRMTTFDGLPSNNIMG 617
Query: 613 IEEDKSGNLWLGTISGLVKLYVAAVGNDFSTRIYTSADGLQDNFIVNSSCSRN--GELFF 670
I ED NLW+ T GL K F T Y DGL N S R+ G FF
Sbjct: 618 ILEDDFNNLWITTDKGLCKYNPRQ--KTFKT--YNIKDGLPGNEFNYKSFLRDSKGAFFF 673
Query: 671 GGHKGYNSFFPDKMEIPSQETNFLITDIKIFN-----HSFSNLPVELQQKISPVMPTYTS 725
GG G SFFP++++ + T +K+FN H+ L L+Q IS +
Sbjct: 674 GGLSGMVSFFPNEIKENKNTPPVIFTGLKLFNKPIALHTGDGL---LKQNISTI-----K 725
Query: 726 KIELPHKYNNFSIEFAALTYKNPELNRYAYRLQNFDRDWQYTDADRRFAYYNNLPSGTYT 785
I N FSI+F L + + NRYAY+L F+++W Y D A Y NL G YT
Sbjct: 726 SITFESDQNVFSIDFTLLNFIKSDKNRYAYKLGGFEKNWNYVDIPS--ASYTNLSPGNYT 783
Query: 786 FQLKATNENGEWSGYVRELTVVVLPPFWATWWAYLLYVIIVSVIGVSIYRTAKNRILLRN 845
+K +N +G W+ L + +LPPF+ TWWAYL Y + I R +L++
Sbjct: 784 LMVKGSNNDGLWTNETSTLDIKILPPFYRTWWAYLFYFCAFAAISFVFIRY----LLIKA 839
Query: 846 ALRLREIEKAKAEELNHAKLQFFTNITHELLTPLTIISATVDEL----KTQAPSHNDLYT 901
L+ K +E+N KL+FFTNI+HE+ TPLT+I +D+L K + DL
Sbjct: 840 VLK-------KEKEINEHKLEFFTNISHEIRTPLTLIVGPLDKLIENAKDDPALNRDLQP 892
Query: 902 VMNSNIQRLIRLLQQILEFRKAETGNLKLRVSPGDIAAFVKNAAESFQPLVKKRKIHFSF 961
+ N N RL+ L+ ++L+FRKAE+G + L VSPGD+ F + +FQ + + I + F
Sbjct: 893 IKN-NADRLMNLVTELLDFRKAESGKMALHVSPGDVVKFCREIFLAFQNMAISKNIDYQF 951
Query: 962 LCDPESMIGYFDMDKLDKILYNLLSNAAKYNKEDGFIQVSLSYDETDKDFILLKIKDNGK 1021
++ YFD +++K+++NLLSNA K+ +G I + + ET+K + +KI DNGK
Sbjct: 952 ETTQAAIELYFDKVQMEKVMFNLLSNAFKFTPVNGKISLKI---ETEKQLVNIKICDNGK 1008
Query: 1022 GISKEKQKNLFKRFYEGDYRKFNTIGTGIGLSLTKDLVELHGGTISVESEVDH-----GT 1076
GI E Q +LF FY+ + TIGTG+GLS +K +VELH G IS ES + T
Sbjct: 1009 GIPLENQASLFTNFYQANAT--TTIGTGLGLSFSKSIVELHHGQISFESTPKNDKAFGNT 1066
Query: 1077 EFMVRIPIERSYYDEEQIDDEAISLMQNPVNY---------EDTQEDADVETQEVTIKAN 1127
F V + + +++ + + + +NY E +ED ++ K N
Sbjct: 1067 AFTVSLKTGKEHFNPSDFIPDYV-YYDDALNYSLSTTTQVTEQIKEDDVLQDDSGKNKKN 1125
Query: 1128 TILLVEDNGELLHLMTKLLSREYNVFTAQNGKEGIAVLEKEDVDLIVSDVMMPEMDGIEF 1187
+ILLVEDN ++ + + LS Y ++ +NG G+ DLI+SDVMMP MDG+E
Sbjct: 1126 SILLVEDNEDVRTFIKQALSPSYQIYERENGATGLECALDLIPDLIISDVMMPVMDGLEL 1185
Query: 1188 CKYVKGHLEMSHIPMILLTAKNKEEDRAEAYEIGADAFISKPFNLTVLHARIRNLLKYKE 1247
C+ +K SHIP++LLTA++ + +E GADA+I KPFNL +L I+NLL +E
Sbjct: 1186 CRKLKTDERTSHIPVVLLTARSAYVHQVNGFENGADAYIMKPFNLKILELNIQNLLNARE 1245
Query: 1248 RMARDFKNQIVFEVKDLNYTSLDEDFIQRAIHCVNNHLEDPNFDQAQFADEMRTSKSTLY 1307
+ + F I E +++ + ++ F+ + I + + + DP+FD + E+ S+ LY
Sbjct: 1246 TVKKKFAQVITLEPRNMVINTTEQHFLNKIIQLIEDRIADPDFDVPTLSAEVGMSQPVLY 1305
Query: 1308 KKLKSLAGLNTSSFIRNVRLKAACRIMEEKGTNVRVSELAYAVGFNDPKYFSSCFKKEFD 1367
KK+++L L+ + FI+++R+K A +++++ GT ++E+AY+VGFND KYFSS FKK F
Sbjct: 1306 KKIRALTDLSVNDFIKSLRIKRAAQLLKQ-GTG-NIAEIAYSVGFNDRKYFSSEFKKHFG 1363
Query: 1368 MLPSEYI 1374
PSE++
Sbjct: 1364 KTPSEFM 1370
Score = 27.7 bits (60), Expect = 0.008
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 11/94 (11%)
Query: 591 RNKGEFEEKTRAYSIPGDVIVSIEEDKSGNLWLGTISGLVKLYVAAVGNDFSTRIYTSAD 650
+NK F+ + ++SI +D G +W GT GL K + S ++Y +
Sbjct: 43 QNKYAFKHLNVENGLTQSSVLSIAQDARGFIWFGTRFGLNKY------DSKSFKVYYHEE 96
Query: 651 GLQD-----NFIVNSSCSRNGELFFGGHKGYNSF 679
+ +F+ + ++G L G G N +
Sbjct: 97 NNEKSLSNASFLSSILALKDGTLLIGTSNGLNKY 130