Pairwise Alignments

Query, 456 a.a., Na+-dependent transporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 460 a.a., sodium-dependent transporter family protein from Marinobacter adhaerens HP15

 Score =  353 bits (906), Expect = e-102
 Identities = 187/456 (41%), Positives = 283/456 (62%), Gaps = 24/456 (5%)

Query: 9   FGSKLGVILASAGSAVGLGNIWRFPYETGNHGGAAFILIYLGCVFLLGLPILIAEFLIGR 68
           + S++  ILA+AGSAVGLGNIW+FPY TG +GG AF+LIYL C+FL+G+P+LIAE +IGR
Sbjct: 15  WSSRMAFILAAAGSAVGLGNIWKFPYITGENGGGAFVLIYLACIFLIGVPVLIAETMIGR 74

Query: 69  RSRANTAGAYQKLAP--GTH--WRWVGRMGVLAAFLILSYYSVVAGWTLEYVYEALTNGF 124
           R   +     + L    GT   WR +G  GV+A+FL+LS+Y+V+ GW L Y+ +A T  F
Sbjct: 75  RGGQSPVATMRTLTKTEGTARGWRAIGWNGVIASFLVLSFYAVIGGWALVYIGKAATGLF 134

Query: 125 TGKTPTEFISSFQQFSSSPWRPVLWLVLFLLVTHFIIVKGVEKGIEKSSKIMMPTLFIII 184
           TG         F    ++PW  ++W  +F+++  FI+ +G+  G+EK+  ++MP LF+++
Sbjct: 135 TGADAEAIGGQFGGLLANPWELLMWHSVFMVIVVFIVGRGIRSGLEKAVNMLMPLLFVLL 194

Query: 185 LILVICSVTLPGAGAGIEFLLKPDFSKVDGNVFLSAMGQAFFSLSLGMGCLCTYASYFSK 244
           + +VI ++     G  + F+  PDFSK+     L+A+G A F+LS+G+G L  Y SY  K
Sbjct: 195 VAMVIYAMNSGSFGRAVSFMFSPDFSKLTTAGVLTALGHAAFTLSIGIGVLMAYGSYLPK 254

Query: 245 ETNLTKTAFSVGIIDTFVAVLAGFIIFPAAFSVGIQPDAGPSLIFITLPNVFQQAFSGVP 304
             N+ +TA ++ ++DT VA+LAG  IFP  F+ G++P AGP LIF+TLP  F Q   G  
Sbjct: 255 TVNIARTAMTIAVVDTSVALLAGLAIFPLVFANGLEPGAGPGLIFVTLPLAFGQMSGGA- 313

Query: 305 ILAYIFSVMFYVLLAMAALTSTISLHEVVTAYLHEEFNFTRGKAARLVTGGCI--FLGIL 362
               +F  +F+ LL +AA+TS IS+ E V  +L E    +R K+A  + GG    F+GI 
Sbjct: 314 ----LFGTIFFALLLVAAITSAISMLEPVVEWLEEHKGVSRAKSA--IGGGLAIWFIGIG 367

Query: 363 CSLSLGVMK-----GFTIF--GLGIFDLFDFVTAKIMLTLGGLCISIFTGWYLDKKIVWS 415
             LS  V +     GF  F  G  +FDL DF+ + +M+ LGGL I++F GW + ++ + +
Sbjct: 368 TVLSFNVWESVHPLGFIPFFEGKTVFDLLDFLVSNLMMPLGGLAIALFAGWAMKRESLPA 427

Query: 416 EITNDGSLKVPVYKLIIFILRYIAPIAISLIFINEL 451
           +I   GS     YK  +F+LRY+ P  I+++F+  L
Sbjct: 428 DIGLQGS----SYKAFMFVLRYLTPAGIAVVFLYNL 459