Pairwise Alignments

Query, 358 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 378 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  199 bits (505), Expect = 1e-55
 Identities = 118/341 (34%), Positives = 192/341 (56%), Gaps = 27/341 (7%)

Query: 33  LYGKATKNTE--NRYERLPDSLKHVSRKPVWNLSRNSAGLAIRFCSNSTTIATKWENLNN 90
           L GKA +NT+  N + R+P   +   R  VWNL++N+AG  + F +N++ I   ++    
Sbjct: 43  LKGKAWQNTDSANYFTRIPAKAEKNVRDAVWNLAKNTAGEYLDFVTNASQIRVNYQVTGG 102

Query: 91  NLMNHMTPTGTKGLDLYT--------WVDGAWRFVNSGRPTGKVNQATIIANMEPVEREY 142
             M +M   G  G+DLY         WV GA+ F ++   + K        N+    ++Y
Sbjct: 103 KSMENMVTIGVSGVDLYAQDTKNNWHWVKGAYSFGDT--ISFKYQNFDSTVNI----KKY 156

Query: 143 MLYLPLYDGVISLSIGIDAEASISVPRTAIPVRTKPIVFYGTSILQGGCANRPGMAHTNI 202
            LYLPLY+    L IG++ +    V      +   P+VFYGTSI+QG  A+RPG+A +NI
Sbjct: 157 RLYLPLYNTPKWLKIGVEKKFDFKVEMADEKL---PLVFYGTSIMQGASASRPGLAWSNI 213

Query: 203 ISRRLNREIVNLGFSGNALLDYEIAEVMSSVDAGVYVLDFVPNASSDQIYEKMETFYRI- 261
           + R+LN+ ++NLGFSGN  L+  + ++++ +DA ++VLD  PN    + Y + E   RI 
Sbjct: 214 LGRKLNKPVINLGFSGNGRLEKPLIDLINEIDAQLFVLDCQPNLHDKKTYSETEIETRIV 273

Query: 262 -----LRDKHPRTPIIFIE-DPVFTHALFDKKIAIEINKKNKAVNSVFKSLKTKGEKNIY 315
                L+ KHP+ PI+ +E      H   D ++       +K +++ ++ LK +G KNI+
Sbjct: 274 NAVNDLKQKHPKVPILLVEHSGGLAHLNLDSELTGRYIWTSKILSNTYQKLKKEGNKNIF 333

Query: 316 IISSEKMLGEDGEATVDGIHFTDLGMMRYADLVCPVIKKVL 356
           I+++++ +G   E+T+DG H  DLGMM+YAD    +I K+L
Sbjct: 334 ILTAQQ-IGFTDESTIDGTHPNDLGMMQYADAYQKIINKIL 373