Pairwise Alignments

Query, 358 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 373 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  170 bits (430), Expect = 6e-47
 Identities = 117/352 (33%), Positives = 192/352 (54%), Gaps = 22/352 (6%)

Query: 23  LKYYDAAKFP---LYGK--ATKNTENRYERLPDSLKHVSRKPVWNLSRNSAGLAIRFCSN 77
           +K+++    P   L GK   +K+T N Y RLP   K   R  VWNL++ +AG  I F +N
Sbjct: 28  MKWFNPVSSPYPVLKGKYWESKDTINFYNRLPSYAKDSVRLAVWNLAKQTAGEYIDFYTN 87

Query: 78  STTIATKWENLNNNLM-NHMTPTGTKGLDLYTWVD-GAWRFVNSGRPTGKVNQATIIANM 135
           +  I  +++  N  L+ + M+   T GLD++   + G W F+N G  + K   +    N+
Sbjct: 88  AGKIVVRYQCGNPYLIFDGMSKISTNGLDMHVQDESGKWHFIN-GFHSFKDTISFTCDNI 146

Query: 136 EPVER--EYMLYLPLYDGVISLSIGIDAEASISVPRTAIPVRTKPIVFYGTSILQGGCAN 193
           +P  +   + LYLPL++    L IG+   A   V   ++    KPIVFYGTSI+QGG  +
Sbjct: 147 DPKVKVKRFRLYLPLHNFPKWLEIGVVKNADFKVEAASVE---KPIVFYGTSIMQGGSTS 203

Query: 194 RPGMAHTNIISRRLNREIVNLGFSGNALLDYEIAEVMSSVDAGVYVLDFVPNA------S 247
           R G+   +I+ RR+++ ++NLGFSGN  L+  I  +++++DA ++VLD  PN        
Sbjct: 204 RHGLTWFSILGRRIDQPMINLGFSGNGRLEKPIINLINTIDAKIFVLDCQPNLIVYSQND 263

Query: 248 SDQIYEKMETFYRILRDKHPRTPIIFIE-DPVFTHALFDKKIAIEINKKNKAVNSVFKSL 306
            ++I +K+      L  KHP+TPI+  E          D  +A   NK +  ++  ++ L
Sbjct: 264 ENEIAKKITLAVETLHQKHPKTPILLTEHSGSLPDITLDTSLAKPYNKTSAVLSGTYQKL 323

Query: 307 KTKGEKNIYIISSEKMLGEDGEATVDGIHFTDLGMMRYADLVCPVIKKVLKK 358
           K K   N++++++ K +G   E+T DG H  D+GMM+YA+     I ++L K
Sbjct: 324 K-KVIPNLHLLAA-KEIGFTYESTGDGTHPNDIGMMQYANAYEKAIHRILGK 373