Pairwise Alignments

Query, 293 a.a., putative endonuclease precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 707 a.a., DNA/RNA non-specific endonuclease from Herbaspirillum seropedicae SmR1

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 63/256 (24%), Positives = 101/256 (39%), Gaps = 29/256 (11%)

Query: 37  PIELPALRNGADDIFLSPTTTFNGQQVITYSMEYDKSKKHARWVAFKYYNVTGQT--NWN 94
           P+  P     A  + L      +G   + Y     K  K  R  AF   N+ G      +
Sbjct: 424 PLPQPDGTLAAQIVPLLAEDAVHGDGELKYEHFSIKLLKPRRLAAFTATNIDGARYLEVD 483

Query: 95  RNDWKQTEWGGDPWQSDPNIPQADQRVQSDFGKQG--YDRGHICASSDRLY-----SKDA 147
           R   +     GD W  DP +P      Q  +G     +DRGH+   SD  +     ++ A
Sbjct: 484 RGSGRVNGAEGDAWFRDPRVPVGAVLEQDFYGAWSNYFDRGHLTRRSDPSWGSPEEAERA 543

Query: 148 NEQTFYYSNMSPQKNYFNGTKGIWNDLEGKVRTWG-RSSTFRDTLYVVKGGTIDKENQIW 206
           N  TF+++N SPQ   FN +   W  LE  V   G  +S+ +  L V +G   + +  +W
Sbjct: 544 NADTFHFTNCSPQHFRFNQSAVYWQGLERYVLENGVLASSTKGRLCVFQGPVFNDQVDLW 603

Query: 207 TYIGGDKSKPVPKYYFMALLCKKGETYKAIGFWLDQSTTVKPA--------------LSE 252
                     +P  +F  ++ K  +  KA+    DQS  +  +              ++ 
Sbjct: 604 A-----DEVQIPSSFFKIVVWKGKQGLKAVALVADQSALLSESRHSLGAPQALPSVEVNH 658

Query: 253 CAKTIDELEELTGLDF 268
               + E+E +TGLDF
Sbjct: 659 WRVAVPEVERMTGLDF 674