Pairwise Alignments

Query, 604 a.a., beta-galactosidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1076 a.a., Beta-galactosidase (RefSeq) from Shewanella loihica PV-4

 Score = 89.4 bits (220), Expect = 7e-22
 Identities = 112/491 (22%), Positives = 196/491 (39%), Gaps = 78/491 (15%)

Query: 33  WGEQLNPKNVLPEYPRPIMERQDWKNLNGSWNYAITKKGEPAPNNYQ---------GEIL 83
           +G +  P  +L E  R     Q + +LNG W + + K  +  P  +          G I 
Sbjct: 53  FGYESEPLALLDEMDRS----QLYLDLNGRWRFHLAKNPDATPKEFAAPEFDASHWGSIQ 108

Query: 84  VPFAVESSLSGVGKTINEHQEL---W------------YQRTFDVPSAWKGKQILLHFGA 128
           VP   E+   G    ++E       W            Y++TF +P+ W+ KQ+ +H GA
Sbjct: 109 VPGNFETQGYGHAIYLDERYPFDTKWPDAPSDHNPTGLYRKTFTLPAHWQQKQVFIHIGA 168

Query: 129 VDWKADVWVNDVKVGQHTGGFTPFYFDITSALNKGNNQLVVKVWDPSDRGEQPRGKQVER 188
                 ++VN  +VG   G  TP  FDIT  L  G+N + +++   SD         +E 
Sbjct: 169 ARSALTLFVNGREVGYSQGAKTPAEFDITPYLQAGDNLVAMQLIRWSD------ASYLES 222

Query: 189 PEGIWYTPVTGIWQTVWLEPVAAQHIAQLKTTPDIDKKTVKVEVATNVCSPD-------- 240
            + +    +TGI + V+L     Q I  ++    +++   + ++A  V            
Sbjct: 223 QDML---RMTGIEREVYLYATPKQRIEDIQVVTHLNEDLTRAKLAIRVDIASHQPGVRAL 279

Query: 241 KVEVKVFD---------GKNLVAKGAALNGVPVELTMPEDVKLWTPESPSLYNMEVTLYK 291
           ++E ++ D          + L  KG A       L  P   KLW  E P+LY + +TL  
Sbjct: 280 ELEARLLDPQGKPVAKANQRLSLKGDAKPVFSQTLISP---KLWNAEMPNLYRLILTLKT 336

Query: 292 D-GKAVDQVKSYTALRKFSTHKDKNGITRLQLNNKDYFQFGPLDQGWWPDGLYTAPTDEA 350
           + G+ +        +RK +    +NG  +L++NNK     G +D+           + E 
Sbjct: 337 EKGETLQVASQQIGVRKIAI---ENG--QLKVNNKAITIRG-VDRHETDPQTGHVVSRET 390

Query: 351 LVYDLKKIKDFGYNMVRKHVKVEPARWYTYCDQLGLIVWQDMPNGGRGPAEWQMHKYYDG 410
           +  D++ +K    N VR         W +  D+ GL V  +        A  + H     
Sbjct: 391 MELDIRLMKQNNINAVRSSHYPNHPYWLSLADRYGLYVIDE--------ANIESHPL--A 440

Query: 411 ADAIRSAASEAN----YRKEWKEIIDYLYSYPSIGVWVPFNEAWGQFKTPEITKWTKEYD 466
            D      +E +    ++   + +++   ++PS+ +W   NEA        + +W K  D
Sbjct: 441 IDDKTQLGNEMSWLPAHQARIERMVERDKNHPSVIIWSLGNEAGEGKLFERLYQWIKRRD 500

Query: 467 PSRLVNPASGG 477
           P+R V     G
Sbjct: 501 PNRPVQYEPAG 511