Pairwise Alignments

Query, 169 a.a., RNA polymerase ECF-type sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 302 a.a., RNA polymerase sigma-70 factor from Ralstonia sp. UNC404CL21Col

 Score = 64.3 bits (155), Expect = 2e-15
 Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 11/160 (6%)

Query: 14  KDKLFRLALRITLDRAEAEDVVQDTMIRVWNKRDEWSQFESVEAYCLIVAKNLAIDR--- 70
           + +LF +A R+   RA+AEDV+QD  +R W++ D+ +  +S EA+ + V   L+IDR   
Sbjct: 23  RPRLFAIAYRMLGSRADAEDVLQDAWMR-WHQTDQ-TALQSAEAWLVTVVTRLSIDRLRA 80

Query: 71  -SQKKEAQNVEITPEMEEEPDANSPYD----QLVHDEKMNIINRLVNELPEKQRLIMQLR 125
              ++EA      PE   EP++++P      +L  D  M ++  ++  L  ++R    +R
Sbjct: 81  AKTEREAYVGWWLPEPLVEPESHAPTPETAVELAGDLSMALL-WVLERLSPEERAAFLMR 139

Query: 126 DIEGESYKKIATLLNLTEEQVKVNLFRARQKVKQRYLEID 165
            +  + Y +IA LL  TE   +  + RA  +V+Q     D
Sbjct: 140 QVFEQDYSEIAALLGKTEAACRQMVHRATDRVQQERPRFD 179