Pairwise Alignments

Query, 394 a.a., putative carbamoyl-phosphate-synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1083 a.a., carbamoyl phosphate synthase large subunit from Azospirillum brasilense Sp245

 Score = 51.2 bits (121), Expect = 1e-10
 Identities = 69/319 (21%), Positives = 139/319 (43%), Gaps = 31/319 (9%)

Query: 6   LYQVYAIKEAVKMGYYVITCDYLPNNPGHQYAHEYYNVSTTDKEAVYELAKRLQVDGVV- 64
           ++ VYA++EA  +   ++ C+    +  +  A   Y    T  E V EL +  Q +G V 
Sbjct: 587 VHAVYALREA-GIETIMVNCNPETVSTDYDTADRLYFEPLT-AEDVIELVRVEQRNGTVL 644

Query: 65  ---AYASDPAAPTAAYVCEKLGLP---TSPYTSVEILSQKDLFRRYLAEHNFNVPKYVGC 118
                         A   EK G+P   TSP  ++++   ++ F++ L + +   P     
Sbjct: 645 GCIVQFGGQTPLKLADALEKAGIPILGTSP-DAIDLAEDRERFQKLLHQLDLLQPANGLA 703

Query: 119 SSYTEALEQIKNLTLPVMIKPVDSSGSKGINKLTNVDQLKDFIEDALSYSREKRIIIEEF 178
            S  EA      +  PV+I+P    G + +  + ++  LK ++ +A+  S +  ++I+ +
Sbjct: 704 RSLEEAETVAARIGFPVVIRPSYVLGGRAMEIVHDMAGLKRYMGNAVKVSGKNPVLIDSY 763

Query: 179 IEKDGYQISGDAFSVDGILKFHCFGNEYYSSSVVKDFAPLG--------ECWPFQMKPEI 230
           ++        DA  VD  +     G + Y + +++     G           P+ +  E 
Sbjct: 764 LQ--------DAIEVDVDVVADATG-QVYIAGIMEHIEEAGIHSGDSACALPPYSLPAET 814

Query: 231 ITELEKDIQRLISELKMGTTAYNVEAILGKNGKLYILELGARSGGSLIPQITELATGVNM 290
           I E+ +  + L   L +     NV+  + K+G +YILE+  R+  + +P + + ATG  +
Sbjct: 815 IAEIGRQGEALARALHV-VGLMNVQFAV-KDGTVYILEVNPRASRT-VPFVAK-ATGTAI 870

Query: 291 VKYVIKAALGEDCSEIEMS 309
            K   +   GE  ++  ++
Sbjct: 871 AKVAARVMAGEKLADFTLN 889



 Score = 35.8 bits (81), Expect = 6e-06
 Identities = 51/229 (22%), Positives = 88/229 (38%), Gaps = 46/229 (20%)

Query: 100 LFRRYLAEHNFNVPKYVGCSSYTEALEQIKNLTLPVMIKPVDSSGSKGINKLTNVDQLKD 159
           LFR  + +     P+     +  EA E ++ + LP +I+P  +    G     N  + +D
Sbjct: 131 LFRDAMDKLGLESPRSRLVRNMQEATEALEFVGLPAIIRPSFTLAGTGGGIAYNRAEFED 190

Query: 160 FIEDALSYSREKRIIIEEFIEKDGYQISGDAFSVDGILKFHCFGNEYYSSSVVKDFA--- 216
            +   L  S    ++IEE +                       G + Y   VV+D A   
Sbjct: 191 IVRGGLRASPVGEVLIEESV----------------------LGWKEYEMEVVRDKADNC 228

Query: 217 ----------PLGECW--PFQMKPEI-ITELEKDIQR-----LISELKMGTTAYNVE-AI 257
                     P+G        + P + +T+ E  I R     ++ E+ + T   NV+ A+
Sbjct: 229 IIVCAIENIDPMGVHTGDSITVAPSLTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAV 288

Query: 258 LGKNGKLYILELGARSGGSLIPQITELATGVNMVKYVIKAALGEDCSEI 306
              NG+L ++E+  R   S    +   ATG  + K   K A+G    E+
Sbjct: 289 NPANGRLIVIEMNPRVSRS--SALASKATGFPIAKIAAKLAIGYTLDEL 335