Pairwise Alignments

Query, 493 a.a., cysteinyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 485 a.a., cysteinyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  343 bits (880), Expect = 8e-99
 Identities = 203/509 (39%), Positives = 278/509 (54%), Gaps = 51/509 (10%)

Query: 5   LTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHLGYKV 64
           + +YNTL RKKE F P     V MYVCG T Y   H+GHAR A+ FDVL RYL H G  V
Sbjct: 1   MQLYNTLTRKKEHFEPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDV 60

Query: 65  RYVRNITDVGHLEHDADEGEDKIAKKARLEELEPMEVVQYYLNRYHKAMEALNVLSPSIE 124
            + RN TDV          +DKI  +A  E L   EV + Y+  +++ M+ LNVL   +E
Sbjct: 61  TFARNFTDV----------DDKIITRANQEGLTSQEVAEKYIATFYEDMDRLNVLRADLE 110

Query: 125 PHASGHIIEQIQLVQKILDAGYAYES-EGSVYFDVAKYNKDYHYGKLSGRNLDDVLNTTR 183
           P A+ HI E I L  ++++   AY +  G VYF V  +     YGKLSGR++DD+ +  R
Sbjct: 111 PRATTHIEEMISLCVRLIEQDKAYATPSGDVYFRVRAFPG---YGKLSGRDVDDLRSGAR 167

Query: 184 DLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHFDIHGG 243
              G+ EK +P DFALWK A+P     W SPW +G PGWH EC+AM  K+L    DIHGG
Sbjct: 168 VAPGE-EKEDPLDFALWKAAKPGEPF-WESPWGNGRPGWHIECSAMSEKHLPLPLDIHGG 225

Query: 244 GMDLIFPHHECEIAQSVASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEFFNGTHK 303
           G DL+FPHHE EIAQ+ A+ G D V YW+HN  + +N  KM KSLGNF T+ +       
Sbjct: 226 GQDLVFPHHENEIAQTEAALGKDFVRYWVHNGFVQVNAEKMSKSLGNFRTIRD------- 278

Query: 304 LLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLIEAIEGLDKITPAATTSEG 363
            + + Y P T+R+F+L  HYRS +DF+ E++  +EK L+R+ EA+  L         + G
Sbjct: 279 -ILENYLPETLRYFLLTKHYRSPIDFTFESMDEAEKNLKRIYEALGLLHAELEREKWTSG 337

Query: 364 INVKE-------LRAKCYEAMNDDLNTPIVIAQLFEGARIINNINAGNATISAEDLK--- 413
              K+       LR    +AM DD+NT   +  +F   R+ N I         E  +   
Sbjct: 338 PLPKDVTEEFEGLRQAFADAMEDDMNTAAALGHVFTMVRLANRILDNKGQRKTEGARAFF 397

Query: 414 ----DLKETFHLFCFDIMG---------LKEEKGSSDGREAAYGKVVDMLLEQRMKAKAN 460
               D   T+    F ++G         L E +     R+      V+ LL+ R+ A+A+
Sbjct: 398 RAVLDEAATW----FAVLGVFGREPAGFLAELRACRVARKGIDPAKVEELLQARINARAD 453

Query: 461 KDWATSDEIRNTLTALGFEVKDTKDGFEW 489
           KD+A +D IR+ + ALG EV+DT  G  W
Sbjct: 454 KDFARADAIRDEIAALGIEVRDTPSGAVW 482