Pairwise Alignments
Query, 1354 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Subject, 1346 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5
Score = 670 bits (1729), Expect = 0.0
Identities = 435/1366 (31%), Positives = 706/1366 (51%), Gaps = 82/1366 (6%)
Query: 22 QNITFSHLTTDDGLSQFSVNSLYIDERGIIWIGTREGLNRYNGNDIKSFKLKKND--PNS 79
Q I F H + GLSQ SV ++ D+ G +W GT+ GLNRY+G FK+ +N N+
Sbjct: 17 QQIYFDHFNVEKGLSQNSVLTIIQDKEGFMWFGTQYGLNRYDGY---RFKIYRNTGLKNA 73
Query: 80 LFSNTVLRITGNKNGKVYLLCTDGVAEFDMTTQRFKTLLQGN---------VDAIYYNEK 130
+ +N + + ++ +++ ++G+ +++ F+ ++ + + IY + K
Sbjct: 74 ISANEINYLFNDREQNLWVATSNGLNKYNPEKDAFEKIVINSSKNWPGSHVITCIYEDSK 133
Query: 131 --LYIGKREEVFVFNENT---NNFDLYYHLAGKDIN-LSCLHLDEKKNLWMGTTS----- 179
L+IG + +N + L L G N + + D+ +W+GTT
Sbjct: 134 SNLWIGSINGLTKMIKNPPYKSELFLKSGLNGLASNEIKAISEDDSGKIWVGTTKGLTVI 193
Query: 180 ---NGVYCLSDDKQLSQP--ITKGNIASIYEDSSKELWIGSWEEGL--YRIRTNGTIDNF 232
NG Y + +P + I +I D +W+G+ G + +TN + N+
Sbjct: 194 DKINGHYAFKTYQADGKPGSLADNYITTIVTDKQHRMWVGTQSGGFSTFNKKTNAFV-NY 252
Query: 233 RHDPKNPNSICSDFVRSCCEDNLGNLWIGTFHGLNRYDKSTGQFQLYTANDNKPDGLTHS 292
+ N +D +R DN GNLWIG+ GL + STG+ + L+ +
Sbjct: 253 NN---GKNGAVNDNIRKMIFDNKGNLWIGSLEGLMIMNPSTGKISSIKHDTENRKSLSQN 309
Query: 293 SIWCIVKDEQGTLWLGTYFGGVNYFNPEYEIYTRYKVGDTEKEGLSSPIVGRMTEDKDG- 351
S++ + D+ +W+GTYFGGVN P ++ ++ G S +V + E+ G
Sbjct: 310 SVYSLFMDKANAIWVGTYFGGVNVTYPTTTVFNNFQNGHINP-AFSDNVVSSVLEENGGK 368
Query: 352 NLWICTEGGGVNVYNRKNNTYRWYRH-EEGKNSISHNNVKAIYYDRTEEIMWIGTHLGGL 410
NLWI TEGGG+N Y + +N Y++ + +S+ N +K + D+ E + WIGTH GGL
Sbjct: 369 NLWIGTEGGGLNFYEKSSNKNTLYKNIQNNSSSLGSNLIKVLLKDKDENL-WIGTHGGGL 427
Query: 411 NKLDLRTNRFTVYRMKAGDPTTLPSDIVRDIVPYEDKLIIATQNGVCLFNPATGTCEHLF 470
N L +N F + A D +I + + + TQNG+ N
Sbjct: 428 NYLARGSNVFKRFLYSAEDQIATSREIPALAEDKKGIIWVGTQNGLYKSNELKNIFTRYN 487
Query: 471 KDTKEGR-NIGMVASLYIDKDETLWVSATGEGVYSYRFDTGKLTHYAHNPSIPNTLSN-N 528
T G + L D ++ LW+ T E Y G+ I N
Sbjct: 488 VKTASGIIEKPSIKCLLNDAEDNLWMGTTSE---LYIKPKGQDRFAPVLQRIKNIRPKIK 544
Query: 529 NVNNIMQDSNGNLWFSTSGSGLDRYRKESNDFENFDMQKDGLSSDCIYEVFESSIQKGDL 588
+N I QDS +W + GL YR ++N E F +++GL S+ I + E +L
Sbjct: 545 YINTIAQDSKKQIWIGSYYGGLYCYRSQNNTLEIFT-EENGLPSNNIQAILEDDSH--NL 601
Query: 589 LLITNQGFSQFDYPQKKFYNYGTENGFPLTAVNENALFVTHDGEVFLGGIQGMISFWEKK 648
+ T+ G S ++ + F NY T +G N+NA + +G ++ GG G+ SF+
Sbjct: 602 WISTSNGLSVYNPGTRHFKNYNTSDGLLNNVFNKNARLKSVNGALYFGGYNGLTSFYPNN 661
Query: 649 LHFTPKSYSIILSRLLVNGKEITAGDDTGILEQSIAYTPEISLKADQSMFSIEYATSNFI 708
+ + ++ + L + K I+A D++G+L+ I +T ++ L DQ+ +IE+A NFI
Sbjct: 662 IQSNNVASPVVFTDLKLFNKSISADDESGLLKADINFTNKLVLAYDQNTLTIEFALLNFI 721
Query: 709 PANRNEIVYRLEGFSDEWNHTDRKQTLITYTNLNPGKYTLVIKS-DGDGIEEA---RLLI 764
+ +N Y+L+G+ WN TYTNL G YT ++K + DG+ A R+ I
Sbjct: 722 KSGKNHFAYKLDGYDKNWNTVSVPAA--TYTNLPSGSYTFLVKGINNDGVYSANIGRIEI 779
Query: 765 RVLPPWYETWWAYLIYTICTVSLLWYLIQNYNSRIKLRESLKYEKKHIEDLEALNQSKLR 824
V PP+Y TWWAYL Y C + + +I Y + +R + EK+ +N+ KL
Sbjct: 780 VVNPPFYGTWWAYLFY-FCVAAAILVIIIRY---LLIRAIFEKEKE-------INEHKLE 828
Query: 825 FFTNISHEFRTPLTLIVGQVETLLQVQTFTPNIYHKILGIYKNSLQLRELITELLDFRKQ 884
FFTNISHE RTPLTLIVG +E L++ + P +Y + I N+ +L L+TELLDFRK
Sbjct: 829 FFTNISHEIRTPLTLIVGPLEDLIETEKDNPELYRSLQPIKNNADRLMNLVTELLDFRKA 888
Query: 885 EQGHMKIKVSRHNLVNFLYENYLLFLEYASSKQINFKFNKQSDDIEVWYDQKQMQKVVNN 944
E G M + V N+V F E ++ F A SKQI + F ++I++++D+ Q++KV N
Sbjct: 889 ESGKMPLHVGSGNIVKFCREIFMAFQNMAISKQIEYNFEADKEEIQLYFDKVQLEKVFFN 948
Query: 945 LLSNALKHTKAEDTISINVSQEDKYVIIEIKDTGTGIAAAEIDKIFDRFYQTERLDSLNT 1004
LLSNA K T E I+ + + D V I+I D G GI AE + +F+RFYQ + ++
Sbjct: 949 LLSNAFKFTPKEGKINFKIEESDHLVTIKICDNGPGIPLAEQENLFERFYQAKSASTI-- 1006
Query: 1005 GAGTGIGLALTKGIIELHHGTIRVESEPGKGSR-----FIITLKSGNQHFTEEQIIRDNA 1059
GTG+GL+ +K I++LHHG I E+ P F ++LK+G HF E I D
Sbjct: 1007 --GTGLGLSFSKSILDLHHGNITFENIPQNADASGLTCFKVSLKTGKSHFKESDFITDAV 1064
Query: 1060 -DANIQQPPETIVPTVEILPDSEWKEEDNKRIEDAK--MLIVEDNESIKQMLVGIFETFY 1116
D + + + VE +E E+ E+ +L+VEDN+ ++ L +T Y
Sbjct: 1065 YDHDEARYGNFLTNAVE----NESAGENLVLAEEQSYHVLLVEDNDDVRSFLKKSLQTKY 1120
Query: 1117 QVTTASDGVEALDIIQKDMPSIILSDVVMPRMSGTELCKQVKTDFNTCHIPVVLLTARTA 1176
+ + +G++ L+ + +P II+SDV+MP + G ELC+++KTD T HIP+VLLTAR+A
Sbjct: 1121 HIHESENGLKGLEKAFEIIPDIIISDVMMPVLDGLELCRRLKTDERTSHIPIVLLTARSA 1180
Query: 1177 VEHNIEGLKIGADDYITKPFNTNLLISRCNNLVNSRRLLQEKFSKQPQAFAQMLATNPMD 1236
H + GL+ GAD YI KPFN +L NL+N+R +++KF+ Q + L N +
Sbjct: 1181 YVHQVNGLENGADSYIMKPFNLKILQLHIQNLLNAREKVKQKFAGIIQLEPKNLLVNTTE 1240
Query: 1237 KEMLDRAMAIIEQHLDNTDFNVNIFAREMGMARTNLFTKLKAVTGQTPNDFILSIRLKKG 1296
+ L + + IIE + + DF+V + + E+GM++ L+ K++A+T + N+FI SIRLK+
Sbjct: 1241 QNFLHKIIQIIETKMTDPDFDVPMLSSEIGMSQPTLYKKIRALTDLSVNEFIKSIRLKRA 1300
Query: 1297 AVMLRNNPELNITEISDRIGFSSSRYFSKCFKEIYHVSPLAYRKGE 1342
A +L+ NI++++ +G++ +YFS FK+ + SP + + E
Sbjct: 1301 AQLLKQKIG-NISDVAYAVGYTDRKYFSIEFKKYFGKSPTEFIQDE 1345
Score = 97.4 bits (241), Expect = 8e-24
Identities = 90/391 (23%), Positives = 171/391 (43%), Gaps = 36/391 (9%)
Query: 273 TGQFQLYTANDNKPDGLTHSSIWCIVKDEQGTLWLGTYFGGVNYFNPEYEIYTRYKVGDT 332
+ Q Q+Y + N GL+ +S+ I++D++G +W GT +G Y ++IY +
Sbjct: 14 SAQQQIYFDHFNVEKGLSQNSVLTIIQDKEGFMWFGTQYGLNRYDGYRFKIYRNTGL--- 70
Query: 333 EKEGLSSPIVGRMTEDKDGNLWICTEGGGVNVYNRKNNTYRWYRHEEGKNSISHNNVKAI 392
K +S+ + + D++ NLW+ T G+N YN + + + KN + + I
Sbjct: 71 -KNAISANEINYLFNDREQNLWVAT-SNGLNKYNPEKDAFEKIVINSSKNWPGSHVITCI 128
Query: 393 YYDRTEEIMWIGTHLGGLNKLDLRTNRFTVYRMKAGDPTTLPSDIVRDIVPYEDKLIIAT 452
Y D ++ +WIG+ + GL K+ + +K+G ++I K+ + T
Sbjct: 129 YED-SKSNLWIGS-INGLTKMIKNPPYKSELFLKSGLNGLASNEIKAISEDDSGKIWVGT 186
Query: 453 QNGVCLFNPATGTCEHLFKDTKEGRNIGMVASLYI-----DKDETLWVSATGEGVYSYRF 507
G+ + + G + FK + G +A YI DK +WV G ++
Sbjct: 187 TKGLTVIDKING--HYAFKTYQADGKPGSLADNYITTIVTDKQHRMWVGTQSGGFSTFNK 244
Query: 508 DTGKLTHYAHNPSIPNTLSNNNVNNIMQDSNGNLWFST------SGSGLDRYRKESNDFE 561
T +Y + N N+N+ ++ D+ GNLW + + +D E
Sbjct: 245 KTNAFVNYNNG---KNGAVNDNIRKMIFDNKGNLWIGSLEGLMIMNPSTGKISSIKHDTE 301
Query: 562 NFDMQKDGLSSDCIYEVFESSIQKGDLLLI-TNQGFSQFDYPQKKFYNYGTENGFPLTAV 620
N + LS + +Y +F + K + + + T G YP +N +NG A
Sbjct: 302 N----RKSLSQNSVYSLF---MDKANAIWVGTYFGGVNVTYPTTTVFN-NFQNGHINPAF 353
Query: 621 NENAL--FVTHDG--EVFLGGIQGMISFWEK 647
++N + + +G +++G G ++F+EK
Sbjct: 354 SDNVVSSVLEENGGKNLWIGTEGGGLNFYEK 384