Pairwise Alignments

Query, 1354 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1368 a.a., hybrid sensor histidine kinase/response regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  716 bits (1847), Expect = 0.0
 Identities = 446/1383 (32%), Positives = 732/1383 (52%), Gaps = 80/1383 (5%)

Query: 4    TILLFLLFLSVTAVRTLGQNITFSHLTTDDGLSQFSVNSLYIDERGIIWIGTREGLNRYN 63
            T +L L   S    +  G++  F +++ + GLSQ +V ++  D  G IWIGT++GLNRY+
Sbjct: 25   TAILVLCVFSKLHAQINGRH--FRNISVEKGLSQSTVFAIKQDTLGFIWIGTQDGLNRYD 82

Query: 64   GNDIKSFKLKKNDPNSLFSNTVLRITGNKNGKVYLLCTDGVAEFDMTTQRFKTLLQGNVD 123
                K ++  K+DP S+ S     +  +  G +++    GV+ ++  T  F         
Sbjct: 83   SKGFKVYRPVKSDPKSVQSYYTRTLFIDHTGSLWVGGNQGVSRYNYATDSFTNYKLPRSL 142

Query: 124  AIYYNEKLYIGKREEVFVFNENTNNFDLYYHLAG----KDINLSCLHLDEKKNLWMGT-- 177
              +Y   +    +  ++  +     F L    AG    K +N    +   K+ +++G+  
Sbjct: 143  GEWYVSSITEDPQHNIWATSVVGGVFKL---TAGESQFKQVNYDSFNTGIKRVVYVGSWK 199

Query: 178  ------TSNGVYCLSDDKQLSQPITKGN----IASIYEDSSKELWIGSWEEGL--YRIRT 225
                  T  G++ ++  K     I  G     I  +Y D     W+ +  +GL  Y   T
Sbjct: 200  QNILIGTEVGLFKMTGPKNKLVKIDLGTDKPAINDVYIDGDV-FWVATEGDGLIQYHFET 258

Query: 226  NGTIDNFRHDPKNPNSICSDFVRSCCEDNLGNLWIGTFHGLNRYDKSTGQFQLYTANDNK 285
             G    F H P    SI  + +R   +D  GN+W+GTF GL  +D +T   + Y    ++
Sbjct: 259  -GEKKVFMHSPGG-KSIADNNIRCVGKDTDGNIWLGTFKGLTIFDLNTNTLENYYHQISQ 316

Query: 286  PDGLTHSSIWCIVKDEQGTLWLGTYFGGVNYFNPEYEIYTRYKVGDTEKEGLSSPIVGRM 345
            P  ++ +S+ C  KD+Q  +WLGT++GG+NY++   +I       +T +  L+  +V  +
Sbjct: 317  PYTISQNSVRCFFKDKQNGIWLGTFYGGINYYHKN-DIKFNLLSQNTGRLSLNDEVVSAI 375

Query: 346  TEDKDGNLWICTEGGGVNVYNRKNNTYRWYRHEEGK-NSISHNNVKAIYYDRTEEIMWIG 404
             ED  GN WI T   G+N +NR  N   ++ + E   NS+S NN+KAI +D  + ++ +G
Sbjct: 376  KEDSKGNFWIGTNDKGLNYWNRATNNISYFSNNENNANSLSANNIKAIAFDNDQNLL-VG 434

Query: 405  THLGGLNKLDLRTNRFTVYRMKAGDPTTLPSDIVRDIVP-YEDKLIIATQNGVCLFNPAT 463
             H GGLN L+  T     YR    DP ++  D+V  I+  Y++++ I T++G+  FNP +
Sbjct: 435  MHNGGLNILNPNTGNVKRYRHSENDPNSIAGDLVYGILKDYKNRIWIGTRSGLDQFNPQS 494

Query: 464  GTCEHLFKDTKEGRNIGM--VASLYIDKDETLWVSATGEGVYSYRFDTGKLTHYAHNPSI 521
             T  H+  D K G+      +  L+ D    +W+  T           G    Y  N   
Sbjct: 495  QTFTHIHLD-KAGKRPSSDDITYLFEDSKHRIWIGTTN----------GVTLFYPDNMLF 543

Query: 522  PNTLSN----NNVNNIMQDSNGNLWFSTSGSGLDRYRKESNDFENFDMQKDGLSSDCIYE 577
             N L+N    + ++ I +D  G +W   S  GL  Y +    F  +  +KD +    IY 
Sbjct: 544  GNDLNNQLRDDVISCITEDKKGRIWIG-SREGLILYDENQQSFVTYKNRKDFIKGT-IYG 601

Query: 578  VFESSIQKGDLLLITNQGFSQFDYPQKKFYNYGTENGFPLTAVNENALFVTHDGEVFLGG 637
            +   +  +G++ + TN+G  +++   K    +   +G      N+ A     DG +  GG
Sbjct: 602  LQPDN--EGNIWVSTNRGLIRYNPEAKTSQAFDETDGLQNNQFNDYAFCKASDGMLLFGG 659

Query: 638  IQGMISFWEKKLHFTPKSYSIILSRLLVNGKEITAGDDTGILEQSIAYTPEISLKADQSM 697
            I+G+  F+   +   P    +  + L V    +T+GD+T ILE  I  + ++   A+   
Sbjct: 660  IKGLSYFYPSSIKQQPLPLKLTFTGLEVFNNSVTSGDETKILENHIDQSTQLEFAAEYKQ 719

Query: 698  FSIEYATSNFIPANRNEIVYRLEGFSDEWNHTDRKQTLITYTNLNPGKYTLVIKSDGDGI 757
            F+I + T N+I ANR + +Y+L+GF  +W HT+  +  ITY NL  G Y  +IK+ G   
Sbjct: 720  FTIHFNTFNYISANRTKYLYKLDGFDKDWQHTEDLK--ITYNNLRAGSYNFLIKAVGPNG 777

Query: 758  EEAR---LLIRVLPPWYETWWAYLIYTICTVSLLWYLIQNYNSRIKLRESLKYEKKHIED 814
            E +    L I + PPWY   W YL   I  V   +   +  + RIK    LK E+   E 
Sbjct: 778  EASAVRTLKIIISPPWYNATWFYLFVFIDLVGASYIAYRIIDQRIKALHQLKLERIDKEK 837

Query: 815  LEALNQSKLRFFTNISHEFRTPLTLIVGQVETLLQVQTFTPNIYHKILGIYKNSLQLREL 874
            +  +NQ K+ FFTN+SHE RTPLTLI+  +E L++  +    I  +   +  N+ +L  L
Sbjct: 838  VRYINQVKMDFFTNVSHELRTPLTLILAPLEELIKKPSTDKVITKRHEMMLINAKRLYNL 897

Query: 875  ITELLDFRKQEQGHMKIKVSRHNLVNFLYENYLLFLEYASSKQINFKFNKQSDDIEVWYD 934
            + +L +FRK E G  K+KVS+ ++V+F++E Y  F   +   Q+ + ++     +  ++D
Sbjct: 898  VDQLFEFRKTETGTRKLKVSKSDIVSFIHEVYESFKPLSDKNQVQYTYHSSEAKLSFYFD 957

Query: 935  QKQMQKVVNNLLSNALKHTKAEDTISINVSQEDKYVIIEIKDTGTGIAAAEIDKIFDRFY 994
               M+K++ NLLSNA K+T A + IS+ +S +D + II + DTG GI+  +I K+FDRFY
Sbjct: 958  NDAMEKILFNLLSNAFKYTGAHNKISVELSTQDNFAIITVTDTGVGISEDDIAKVFDRFY 1017

Query: 995  QTERLDSLNTGAGTGIGLALTKGIIELHHGTIRVESEPGKGSRFIITLKSGNQHFTEEQI 1054
            Q   +++     G+G+GLA TK +IELHHG+I+ ESE G+GS+F +++   +  + +E +
Sbjct: 1018 Q---VNNQEMNLGSGVGLAFTKRLIELHHGSIKAESELGRGSKFTVSIPMADAVY-QEDV 1073

Query: 1055 IRDNADANIQQPPETIVPTVEILPDSEW-----------KEEDNKRIEDAKMLIVEDNES 1103
              +N    +     +IVP  E + ++              E D +R   +K+L+V+DN+ 
Sbjct: 1074 KTENMRYEL-----SIVPEEEAIAENNLMYADQSLTIGLNENDGQR---SKLLLVDDNKE 1125

Query: 1104 IKQMLVGIFETFYQVTTASDGVEALDIIQKDMPSIILSDVVMPRMSGTELCKQVKTDFNT 1163
            I   L   F+  Y++T A DG  ALDI++ +   +I+SDV+MP + G   CK++K + NT
Sbjct: 1126 ILDYLQDYFKESYEITIAFDGKMALDILENEQFDLIVSDVMMPELDGLHFCKRLKQNINT 1185

Query: 1164 CHIPVVLLTARTAVEHNIEGLKIGADDYITKPFNTNLLISRCNNLVNSRRLLQEKFSKQP 1223
             HIPV+LLTA+T V   I+GL++GADDYITKPF+  +L ++  +L+ SR+ L+E +    
Sbjct: 1186 SHIPVILLTAKTEVNQQIKGLEMGADDYITKPFSVEMLGAKIASLLKSRKRLKEYYGGSK 1245

Query: 1224 QAFAQMLATNPMDKEMLDRAMAIIEQHLDNTDFNVNIFAREMGMARTNLFTKLKAVTGQT 1283
            +   Q LA N +D+E L  A+AI+E++L ++DF+V+ F+RE+GM+R+NL+ K KA+TG++
Sbjct: 1246 EVVPQNLAFNTLDEEFLKEAIAIVEKYLADSDFSVDKFSREIGMSRSNLYLKFKAITGES 1305

Query: 1284 PNDFILSIRLKKGAVMLRNNPELNITEISDRIGFSSSRYFSKCFKEIYHVSPLAYRKGEE 1343
              DFI  IR  K AV L  +    I +I+   GF+S  YFS  FK+ Y   P  Y   E+
Sbjct: 1306 ATDFIKRIRFSK-AVELMQSKRYTIAQITYMCGFNSPSYFSTAFKQYYGCMPSEYLARED 1364

Query: 1344 KEE 1346
            + E
Sbjct: 1365 EME 1367