Pairwise Alignments

Query, 1354 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1365 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  689 bits (1778), Expect = 0.0
 Identities = 432/1391 (31%), Positives = 735/1391 (52%), Gaps = 74/1391 (5%)

Query: 1    MRKTILLFLLFLSVTAVRTLGQNITFSHLTTDDGLSQFSVNSLYIDERGIIWIGTREGLN 60
            +R   L F   L +       +++ F+HL  ++GLSQ SV ++  D+   IW+GTR GLN
Sbjct: 3    LRLIALWFFPMLFICTTLCAQKHLVFNHLRMENGLSQNSVMAITQDKNQFIWMGTRHGLN 62

Query: 61   RYNGNDIKSFKLKKNDPNSLFSNTVLRITGNKNGKVYLLCTDGVAEFDMTTQRFKTLLQ- 119
            RY+G   K +    ++ NSL  N +  +  +  G++++   +G+  ++     F  + + 
Sbjct: 63   RYDGYRFKIYNNSSDNLNSLSDNVINTLLSDSKGRLWVGTENGLNIYNDKNDHFYRINKR 122

Query: 120  --------GNVDAIYYN--EKLYIGKREEV-FVFNENTNNFDLY-YHLAGKDINLSCLHL 167
                     +V+ IY +  + +++G    +  V +     F  + +        L+C+  
Sbjct: 123  SSANSFSCDSVECIYEDPQKNIWVGTYNGLNLVIDTEKQIFKKFLFDKPNYKSALNCIFS 182

Query: 168  ---DEKKNLWMGTTSN--------GVY---CLSDDKQLSQPITKGNIASIYEDSSKELWI 213
               DEK+NLW+GT +         G Y       +      I+   + SI  D  K LW+
Sbjct: 183  IFKDEKQNLWVGTYNGLVRIYQVKGKYHFEIFRHNPNNKNSISSNAVKSIVIDKQKRLWL 242

Query: 214  GSWEEGLYRIRTNGTIDNFRHDPKNPNSICSDFVRSCCEDNLGNLWIGTFHGLNRYDKST 273
            G++         + T   ++    +PNSI ++ +R    D +GN+WIGT  GL+  D +T
Sbjct: 243  GTYNGLNLFDYEHKTFKRYQTSATDPNSIINNDIRKLTRDKVGNIWIGTQEGLSILDPNT 302

Query: 274  GQFQLYTANDNKPDGLTHSSIWCIVKDEQGTLWLGTYFGGVNYFNPEYEIYTRYKVGDTE 333
             +F  Y  +  +PDGL+ +SI  I +D  G+++LGTY+ G N   P    +T ++   T 
Sbjct: 303  RKFSNYRYDPEQPDGLSQNSIHSIFQDLNGSVYLGTYYKGANVVYPSATPFTVFRNSKT- 361

Query: 334  KEGLSSPIVGRMTEDKDGNLWICTEGGGVNVYNRKNNTYRWYRHEEGKNS-ISHNNVKAI 392
            ++GLSS IV  M ED++ NLWI TEGGG+N  NR N+T+ +Y+ E   N+ ++ N +K +
Sbjct: 362  RQGLSSDIVSAMVEDQNHNLWIGTEGGGLNYVNRSNHTFTYYKLEPNSNNGLNSNLIKTL 421

Query: 393  YYDRTEEIMWIGTHLGGLNKLDLRTNRFT-VYRMKAGDPTTLPSDIVRDIVPYEDKLIIA 451
              D+T +++ +GTH GGL   +   + F  +  +K        S+++      +  + + 
Sbjct: 422  CLDKTGQLL-VGTHRGGLYLFNAAGHNFKKIINVKNKKNNPGGSEVIAITEDSDGTVWVG 480

Query: 452  TQNGVCLFNPATGTCEHLFKDTKEGRNIG--MVASLYIDKDETLWVSATGEGVYSYRFDT 509
            +++G+       G        +   +N+    +  ++ DK + LW+  T  G+Y+Y   T
Sbjct: 481  SRDGLSTLKKTNGLYAATTVKSPLEQNLRNKYIQVIFEDKAKNLWIG-TMAGLYAYHPAT 539

Query: 510  GKLTHYAHNPSIPNTLSNNNVNNIMQDSNGNLWFSTSGSGLDRYRKESNDFENFDMQKDG 569
             ++T Y  N + P +L+++++N I+Q  NGN+   TS  GL  +  +S  F+N++ +KDG
Sbjct: 540  KRITAYYKNKTKPGSLNSDHINCIVQIQNGNICVGTSFGGLSIFDNKSRKFKNYN-EKDG 598

Query: 570  LSSDCIYEVFESSIQKGDLLLITNQGFSQFDYPQKKFYNYGTENGFPLTAVNENALFVTH 629
            L +  +  + E   ++ +L + T++G S+      +F NY   +G      N  +     
Sbjct: 599  LPNSNVLGIIED--EENNLWISTDKGLSKLITKTGRFINYTKSDGLAGNDFNIRSFLKDS 656

Query: 630  DGEVFLGGIQGMISFWEKKLHFTPKSY--SIILSRLLVNGKEITAGDDTGILEQSIAYTP 687
             GE+F GG  G+ +F+  ++          I  + L +  K +      G+L + I    
Sbjct: 657  RGELFFGGYDGLTAFYPSQIDINSNRNVAPITFTELKLFDKPVAVNAPDGLLNEDIKSIK 716

Query: 688  EISLKADQSMFSIEYATSNFIPANRNEIVYRLEGFSDEWNHTDRKQTLITYTNLNPGKYT 747
            +I+ K D + FS+++A  N+I   +N   Y L+G S +W  TD     +TY++L  G YT
Sbjct: 717  QITFKHDNNNFSLDFALLNYIKPEKNSYRYILKGHSKDWVKTDVPS--VTYSDLPAGNYT 774

Query: 748  LVI---KSDGD-GIEEARLLIRVLPPWYETWWAYLIYTICTVSLLWYLIQNYNSRIKLRE 803
             ++    +DG+ G + A L I VLPP++ TWWAYLIY  C   LL+ +++    R  L  
Sbjct: 775  FIVTGNNNDGNPGNKPASLKITVLPPFWATWWAYLIYLACFSGLLFLIVRYLFVRALL-- 832

Query: 804  SLKYEKKHIEDLEALNQSKLRFFTNISHEFRTPLTLIVGQVETLLQVQTFTPNIYHKILG 863
                  K  ED++ +   KL FFT ++HE RTPLTLI+G +E L +       +  +I+ 
Sbjct: 833  ------KRTEDIQKM---KLNFFTYVAHEIRTPLTLILGPLENLSKQYQTDTELNRQIIP 883

Query: 864  IYKNSLQLRELITELLDFRKQEQGHMKIKVSRHNLVNFLYENYLLFLEYASSKQINFKFN 923
            I  N+ +L  LITEL+DFRK E GH+ + V+  N+V+F+ E ++ F   A +  I ++F 
Sbjct: 884  IKNNANRLMRLITELMDFRKAETGHLTLHVTEDNIVDFINEIFISFSHLAQTNDIQYEFV 943

Query: 924  KQSDDIEVWYDQKQMQKVVNNLLSNALKHTKAEDTISINVSQEDKYVIIEIKDTGTGIAA 983
            +  ++I +++D++Q++KV+ NLLSNA K       IS+ +   D  V I I D G GI A
Sbjct: 944  RGQENISLFFDKRQLEKVLFNLLSNAFKFCDKGGKISVTLVDMDNEVAISIADNGLGIPA 1003

Query: 984  AEIDKIFDRFYQTERLDSLNTGAGTGIGLALTKGIIELHHGTIRVESEPGKG-----SRF 1038
              +  +F  ++Q +   S     G+GIGLAL+K I+E H G I VES P +      + F
Sbjct: 1004 ESLKNLFSDYFQVDEQHS--NQIGSGIGLALSKAIVEEHKGHIAVESTPAENGERGFTNF 1061

Query: 1039 IITLKSGNQHFTEEQIIRDNADANIQQPPETIVPTVEILPDSEW---KEEDNKRIEDAKM 1095
             + LK G  HF  +  I D A      P    + T +  P+ E    K E    +    +
Sbjct: 1062 TVRLKKGKSHF--KTAIFDGAK---DYPTHPNIYTQQ--PEKELNILKPEKETDLSTETI 1114

Query: 1096 LIVEDNESIKQMLVGIFETFYQVTTASDGVEALDIIQKDMPSIILSDVVMPRMSGTELCK 1155
            L+VEDN  I+Q++  +    Y V  + +G+   +   + +P +I+ D++MP M G ELC+
Sbjct: 1115 LVVEDNSEIRQLIASLIGGHYLVAESENGLMGWETAVETLPDLIICDIMMPIMDGIELCR 1174

Query: 1156 QVKTDFNTCHIPVVLLTARTAVEHNIEGLKIGADDYITKPFNTNLLISRCNNLVNSRRLL 1215
            ++K D  T HIPV++LTAR++  H + GL+ GAD YITKPF+  LL+    NL+ SR+++
Sbjct: 1175 RLKEDERTSHIPVIILTARSSHIHQVSGLETGADAYITKPFSPELLLLNVRNLLMSRQVM 1234

Query: 1216 QEKFSKQPQAFAQMLATNPMDKEMLDRAMAIIEQHLDNTDFNVNIFAREMGMARTNLFTK 1275
            ++KF K      + L  N +D+  + + +  I++H+ + DF V+  A  +GM+R  L+ K
Sbjct: 1235 RQKFLKHIHLQPKELTINAIDEAFMLKLLKYIDEHITDEDFGVSELASMVGMSRPVLYKK 1294

Query: 1276 LKAVTGQTPNDFILSIRLKKGAVMLRNNPELNITEISDRIGFSSSRYFSKCFKEIYHVSP 1335
            ++ +T  + NDF+ SIRLKK   + + N    I E++ ++GF+  +YFS+ FK+ +  SP
Sbjct: 1295 IRNLTNLSVNDFVKSIRLKKAMELFKQN-RFTIYEVAYQVGFNDPKYFSREFKKQFGKSP 1353

Query: 1336 LAYRKGEEKEE 1346
             A+  G E+E+
Sbjct: 1354 RAFMNGSEEED 1364