Pairwise Alignments

Query, 1354 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  583 bits (1504), Expect = e-170
 Identities = 408/1390 (29%), Positives = 674/1390 (48%), Gaps = 118/1390 (8%)

Query: 7    LFLLFLSVTAVRTLGQNITFSHLTTDDGLSQFSVNSLYIDERGIIWIGTREGLNRYNGND 66
            +F L++           I   +L  + GLS   VNSLY+D  G +W+GT +GLNRY+G  
Sbjct: 12   IFFLWMGTGICFAQSTAIPLKYLGVESGLSNNVVNSLYLDHFGFMWMGTYDGLNRYDGYH 71

Query: 67   IKSFKLKKNDPNSLFSNTVLRITGNKNGKVYLLCTDGVAEFDMTTQRFKTLLQGNVDAIY 126
             K F+    D +SL +N +  + G+   +V++    G++ +D    RF  L+        
Sbjct: 72   FKVFRNGWGDEHSLVNNHITVLNGDAKNRVWVGTQKGISYYDYADSRFHQLI-------- 123

Query: 127  YNEKLYIGKREEVFVFNENTNNFDLYYHLAGKDINLSCLHLDEKKNLWMGTTSNGVYCLS 186
            Y +K   G++ EV                      ++ + + +   +++ T   G++ L 
Sbjct: 124  YLDK---GRKNEV-------------------SYAINSIAISQALAVYVATEEKGLFMLK 161

Query: 187  DDKQLSQPITKGN-----IASIYEDSSKELWIGSWEEGLYRIRTNGTIDNFRHDPKNPNS 241
             +  L++ I  G      + ++Y D  + LW+   + GL +       D  ++  +   +
Sbjct: 162  KNSSLAERIPFGKNFDFTVKALYIDDDQTLWLFIKDVGLCKY------DKDQNKVRLVTA 215

Query: 242  ICSDFVRSCCEDNLGNLWIGTFHGLNRYDKSTGQFQLYTANDNKPDGLTHSSIWCIVKDE 301
              S  V    +D    LW+GT  GL ++DK       +  +      L + +I  ++ D 
Sbjct: 216  ALSS-VTCITKDTKQTLWLGTERGLFQFDKVKASISKFNQH------LNNENIMGLLLDR 268

Query: 302  QGTLWLGTYFGGVNYFNPEYEIYTRYKVGDTEKEGLSSPIVGRMTEDKDGNLWICTEGGG 361
            Q  LW+ T  GGV  ++ + +  T Y     EK  LSS  V ++ ED +   WI T  GG
Sbjct: 269  QQKLWISTDGGGVAVYDTKKQ-KTSYLSAGKEKGLLSSNSVAQVYEDHESRKWIATLRGG 327

Query: 362  VNVYNRKNNTYRWYRHEEGKNSISHNNVKAIYYDRTEEIMWIGTHLGGLNKLDLRTNRFT 421
            VN+ + +N  +   +H+  K++   NN    + +   + +WIGT  GGL+  + + N F 
Sbjct: 328  VNIIDTENEQFTTIKHDPLKSNSLINNFVLSFSEDENKNIWIGTDGGGLSVWNRKLNTFA 387

Query: 422  VYRMKAGDPTTLPSDIVRDIVPYEDK--LIIATQNGVCLFNPATGTCEHL-FKDTKEGRN 478
             Y  K  DP +L S+ V  I+   D    + +   G+  FN  TG   H    +T +G +
Sbjct: 388  NYA-KTSDPNSLTSNFVTSILNDADHNVWVASFSGGIDRFNKTTGKFVHYNCYNTSKGVD 446

Query: 479  IGMVASLYIDKDETLWVSAT-GEGVYSYR--------FDT------------------GK 511
               +  LY DK + +WV  T G  +Y Y         FDT                  G 
Sbjct: 447  DINIWKLYQDKQQNIWVGTTKGGALYRYNKSIDKFELFDTKLKDIHSLFQDSKGRLWAGN 506

Query: 512  LTHYAH----NPSIPNTLSNNNVNNIMQDSNGNLWFSTSGSGLDRYRKESNDFENFDMQK 567
             T        N     T  N  +  I +D N  +W  T G GL  +  E+   + + +Q 
Sbjct: 507  YTELIEIDPVNKKHNYTKINFAIRAIQEDFNHQIWIGTEGGGLLLFDPETKKIKRY-IQS 565

Query: 568  DGLSSDCIYEVFESSIQKGDLLLITNQGFSQFDYPQKKFYNYGTENGFPLTAVNENALFV 627
            DGL S+ +  + + +  +G+L   T  G S+FD     F NY   +G      N NA   
Sbjct: 566  DGLPSNSVLNILQDA--QGNLWCSTYNGLSRFDVRHHSFKNYYATDGLQSNQFNYNAALK 623

Query: 628  THDGEVFLGGIQGMISFWEKKLHFTPKSYSIILSRLLVNGKEITAGDDTGILEQSIAYTP 687
              +G    GGI G   F    +    +   ++L+   +N   I    D+   + S+    
Sbjct: 624  LANGNFLFGGIGGFNLFSPDSIKKNKRIPKMVLTDFRINN--IPLDQDSAYNDISVINLA 681

Query: 688  EISLKADQSMFSIEYATSNFIPANRNEIVYRLEGFSDEWNHTDRKQTLITYTNLNPGKYT 747
             I +    ++ SI+YA   F   ++    Y LEG+  +WN+ ++  T   Y+ LN G+Y 
Sbjct: 682  RIEIPFSDAVISIDYAAIEFSFQDQISYAYYLEGWDRDWNYVNKLSTAY-YSRLNEGEYK 740

Query: 748  LVIKS-DGDGI---EEARLLIRVLPPWYETWWAYLIYTICTVSLLWYLIQNYNSRIK-LR 802
            L IKS D +G     E  ++IR+LPPWY TWWAY IY I   S+ +YL Q Y +R + L+
Sbjct: 741  LHIKSTDTEGAWSNNEKIVVIRILPPWYRTWWAYTIYLIIGSSI-FYLFQTYRNRQRRLK 799

Query: 803  ESLKYEKKHIEDLEALNQSKLRFFTNISHEFRTPLTLIVGQVETLLQVQTFTPNIYHKIL 862
              ++     +E  + LN+ KL FFTNISHE RTPLTLIV  ++ ++  +   P   + + 
Sbjct: 800  HEVEITNLKMEREKDLNEKKLNFFTNISHELRTPLTLIVNPIKDIILKKDPGPE-KNDLN 858

Query: 863  GIYKNSLQLRELITELLDFRKQEQGHMKIKVSRHNLVNFLYENYLLFLEYASSKQINFKF 922
             +Y+NS +L  L+ +LL FRK E  +  +K+ R NL  F  E +L F   A    I++ F
Sbjct: 859  IVYRNSRRLLSLVDQLLLFRKTESENDTLKIVRINLYKFTNEIFLCFNYLAKQNHIDYTF 918

Query: 923  NKQSDDIEVWYDQKQMQKVVNNLLSNALKHTKAEDTISINVSQEDKYVIIEIKDTGTGIA 982
              + ++++++ D+ +++ V  NLLSNALK T     +  +V      V IE+ D+G GI 
Sbjct: 919  ECEEEELDIYADKDKLEIVFFNLLSNALKFTPKGGFVKFSVKPLGMRVQIEVSDSGPGIP 978

Query: 983  AAEIDKIFDRFYQTERLDSLNTGAGTGIGLALTKGIIELHHGTIRVESEPGKGSRFIITL 1042
            A   +K+FD+FY+    +SL  G G  IGL L K  +ELH G I   S  G G+ F+I +
Sbjct: 979  AHVGEKLFDKFYKVMSNESLKMGFG--IGLYLAKNFVELHKGKISFRSNQGMGTIFLIDI 1036

Query: 1043 KSGNQHFTEEQIIRDNADANIQQPPETIVPTVEILPDSEWKEEDNKRIEDAKMLI----- 1097
              G  +     + ++          E       I  + E +  D + + + ++LI     
Sbjct: 1037 PVGEPNLQHSGVFQN----------ELTYVNELIAQEEEAENNDTEHVGNLQLLISDLHS 1086

Query: 1098 ---VEDNESIKQMLVGIFETFYQVTTASDGVEALDIIQKDMPSIILSDVVMPRMSGTELC 1154
               ++DN  I   +  IF+  +++  A +G + L   ++ +P I++SDV M  ++G ELC
Sbjct: 1087 ILVIDDNPEIIDYIRHIFQENFKIYKAENGTDGLKRCKEYLPDIVISDVNMDGLNGIELC 1146

Query: 1155 KQVKTDFNTCHIPVVLLTARTAVEHNIEGLKIGADDYITKPFNTNLLISRCNNLVNSRRL 1214
            K +K D    HIPV+LLT   + E  ++G+++GA D+I+KPF+  L  ++ N+++ +R  
Sbjct: 1147 KAIKDDSALSHIPVILLTGDPSPEVKLKGIEVGAYDFISKPFDRELFTAKINSIIKNRTN 1206

Query: 1215 LQEKFSKQPQAFAQMLATNPMDKEMLDRAMAIIEQHLDNTDFNVNIFAREMGMARTNLFT 1274
            LQ  F  +    +     +  DK  L + + IIE++L    FNV I A ++GM+ +NL+ 
Sbjct: 1207 LQSYFYNEITLKSDAHKVSQEDKGFLQKCIMIIEENLMEDSFNVKILASDLGMSHSNLYK 1266

Query: 1275 KLKAVTGQTPNDFILSIRLKKGAVMLRNNPELNITEISDRIGFSSSRYFSKCFKEIYHVS 1334
            ++KA +GQ+ N FI  IRL+K A +L N   LNI E + R+G + S+YF + F++++ ++
Sbjct: 1267 RIKATSGQSVNGFIRFIRLRKAAELLINT-NLNINEAAFRVGINDSKYFREQFQKLFKLT 1325

Query: 1335 PLAYRKGEEK 1344
            P  + K   K
Sbjct: 1326 PSEFIKKHRK 1335