Pairwise Alignments

Query, 1354 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  581 bits (1497), Expect = e-169
 Identities = 416/1385 (30%), Positives = 684/1385 (49%), Gaps = 94/1385 (6%)

Query: 7    LFLLFLSVTAVRTLGQNITFSHLTTDDGLSQFSVNSLYIDERGIIWIGTREGLNRYNGND 66
            LF L + +     L     FSHL  + GLS  SVN++Y D  G +W GT +GLN+YNG  
Sbjct: 8    LFFLIILIIRFTDLHAQDLFSHLGIEKGLSNNSVNAIYKDHFGFMWFGTDDGLNQYNGYS 67

Query: 67   IKSFKLKKNDPNSLFSNTVLRITGNKNGKVYLLCTDGVAEFDMTTQRFKTLLQGNVDAIY 126
             + ++   ND +SL +N V+ +  + +G +++    GV+       +F       V  I+
Sbjct: 68   FRIYRNNPNDSSSLVNNQVIGMAEDGSGTLWIATKRGVSVLHSFPSKF-------VKPIF 120

Query: 127  --YNEKLYIGKREEVFVFNENTNNFDLYYHLAGKDINLSCLHLDEKKNL----------- 173
              YN+K      +E++   +  N+ D++   +   + +   H  E + +           
Sbjct: 121  KAYNDKKARPIDQEIYAI-KGGNHGDVFIGASDLGLLVYDNHSRETRQVSFQPGEKVLTP 179

Query: 174  -------------WMGTTSNGV-YCLSDDKQLSQPITKGNIA---SIYEDSSKELWIGSW 216
                         W+   + G+ Y     KQ+S   + G+I    SI  D S  LWIG+ 
Sbjct: 180  YSIRAIRPVQDRAWLINPAKGLAYYDYRSKQISLVSSNGDIRNANSIEADQSGNLWIGT- 238

Query: 217  EEGLYRIRTNGTIDNFRHDPKNPNSICSDFVRSCCEDNLGNLWIGTFHG-LNRYDKSTGQ 275
            + GLYR   N    +F+     P  + +  + S   D    L I T  G +N  D     
Sbjct: 239  DHGLYRY--NILAKSFKWYSVAPGQLLAQRILSLAFDRRNRLLIATDGGGINIMDTEKES 296

Query: 276  FQLYTANDNKPDGLTHSSIWCIVKDEQGTLWLGTYFGGVNYFNPEYEIYTRYKVGDTEKE 335
            F   TA ++ P  L  ++I  I+KDE+  +W+GT  GG+N  + +   +         ++
Sbjct: 297  FSYQTAGES-PSSLNSNAISVILKDEEHRIWVGTLRGGINVLDRKRNEFKHIYRNPLSQQ 355

Query: 336  GLSSPIVGRMTEDKDGNLWICTEGGGVNVYNRKNNTYRWYRHEEGK-NSISHNNVKAIYY 394
             L S  +    ED+DG +WI T+GGG+++++R    ++ YRHE G   S+S NNV +I  
Sbjct: 356  SLVSDFILSFCEDRDGKIWIGTDGGGISLWDRLKG-FKTYRHENGNPQSLSSNNVTSIVR 414

Query: 395  DRTEEIMWIGTHLGGLNKLDLRTNRFTVYRMKAGDPTTLPSDIVRDIVPYEDKLIIATQN 454
               + ++WI T  GG+N+ +  +  F  Y     +      ++ +  +  +  +   T  
Sbjct: 415  SNND-VIWIATFGGGINRYNRGSGTFKYY--PCANSWGKDENVWKLFIDKKGGIWAGTCV 471

Query: 455  GVCL---FNPATGTCEHLFKDTKEGRNIGMVASLYIDKDETLWVSATGEGVYSYRFDTGK 511
            GV L   +N A+   E          ++  + ++  DK   LW  +  + +Y Y      
Sbjct: 472  GVGLLYHYNVASDRFEPF-----NNEHLKNIIAINEDKLGNLWFGSFNK-LYKYTAGGKV 525

Query: 512  LTHYAHNPSIPNTLSNNNVNNIMQDSNGNLWFSTSGSGLDRYRKESNDFENFDMQKDGLS 571
            +T+    P          + +I  + +G+L+  T  +GL +Y  ++  F+ F  + DGLS
Sbjct: 526  ITYDIRYP----------IRSIFFNKSGDLFVGTQYAGLLKYNSKNGSFQAFT-ESDGLS 574

Query: 572  SDCIYEVFESSIQKGDLLLITNQGFSQFDYPQKKFYNYGTENGFPLTAVNENALFVTHDG 631
            ++ +  + E      +L L T  G ++F+Y    F  +  ENG      N NA      G
Sbjct: 575  NNTVLNIEEDD--HANLWLSTFNGLTKFNYRNNTFNKFYIENGLQCNEFNYNASAHLRSG 632

Query: 632  EVFLGGIQGMISFWEKKLHFTPKSYSIILSRLLVNGKEITAGDDTGILEQSIAYTPEISL 691
            ++  GGI+G   F    +        + L+ L  + + + +         S+  T EI +
Sbjct: 633  QLLFGGIKGFNIFNPDSIMNNSAFPPLRLTDLRASNEPLISD---AAYSASLYDTKEIKI 689

Query: 692  KADQSMFSIEYATSNFIPANRNEIVYRLEGFSDEWNHTDRKQTLITYTNLNPGKYTLVIK 751
              D+++ S +Y+   +   +R    Y LEG  + WN+  R      Y+ L+ G Y L I+
Sbjct: 690  PYDRALLSFDYSALEYSFPSRISYSYYLEGLENNWNNV-RTARSGNYSRLHEGTYVLHIR 748

Query: 752  S-DGDGIEEARLL---IRVLPPWYETWWAYLIYTICTVSLLWYLIQNYNS-RIKLRESLK 806
            S +G+GI   R L   I +LPPWY +WWAYL Y +  +S L Y    Y S +++L   ++
Sbjct: 749  STNGEGIWNPRQLTLKIIILPPWYRSWWAYLTY-LAIISYLLYRFNRYKSNQVRLNYQIE 807

Query: 807  YEKKHIEDLEALNQSKLRFFTNISHEFRTPLTLIVGQVETLLQVQTFTPNIYHKILGIYK 866
                + E    LN+ KL FFT+ISHEFR+PLTLI+  V+ LL       ++    + +Y 
Sbjct: 808  MATANAEKERELNERKLSFFTHISHEFRSPLTLIINPVKELLYSSGKNIDVSDLSI-VYL 866

Query: 867  NSLQLRELITELLDFRKQEQGHMKIKVSRHNLVNFLYENYLLFLEYASSKQINFKFNKQS 926
            N+ +L  L+ +LL FRK +     +K+S+ N+V    + +L F   A  K I+  F    
Sbjct: 867  NAKRLLSLVDQLLLFRKADHEEDDLKISKLNIVLVCKDVFLCFTSQARLKNIDITFESAE 926

Query: 927  DDIEVWYDQKQMQKVVNNLLSNALKHTKAEDTISINVSQEDKYVIIEIKDTGTGIAAAEI 986
            + IE++ D+++++ V+ N+LSNA K T+   +I + V   D  + I I+D G GI     
Sbjct: 927  EYIEIFADREKIEIVLFNILSNAFKFTEKNGSIHVKVEDYDGRIAILIQDNGRGIHPEIG 986

Query: 987  DKIFDRFYQTERLDSLNTGAGTGIGLALTKGIIELHHGTIRVESEPGKGSRFIITLKSGN 1046
            DK+FD+FYQ  +  +++   G GIGL L K  I  H G +   SE G+G+ F I L  G 
Sbjct: 987  DKLFDKFYQAPKSYNVSV-KGFGIGLYLAKKFITSHKGELTYHSEIGEGTVFRIELLKGL 1045

Query: 1047 QHFT-------EEQIIRDNADANIQQPPETIVPTVEILPDSEWKEEDNKRIEDAKMLIVE 1099
            +H         + + I  + D   ++  E +    +  PDS   E DN   E   +LIV+
Sbjct: 1046 EHLAGITVHHEDTEFIMPDLDLAEEEAEEPVTAMEQ--PDSG--ELDNLVSEQPAILIVD 1101

Query: 1100 DNESIKQMLVGIFETFYQVTTASDGVEALDIIQKDMPSIILSDVVMPRMSGTELCKQVKT 1159
            DNE  +Q +  IF+  + +  A DG + L   +K +P II+SDV MP   G +LC ++K 
Sbjct: 1102 DNELFRQYIKRIFKESFIIYEAVDGEDGLIKAKKQLPDIIISDVTMPVKDGIQLCTEIKA 1161

Query: 1160 DFNTCHIPVVLLTARTAVEHNIEGLKIGADDYITKPFNTNLLISRCNNLVNSRRLLQEKF 1219
            D    HIPV+LLT+ T+ E  ++GL+ GA+DYITKPF   LL +R NN++ SR  LQ  F
Sbjct: 1162 DPAISHIPVILLTSSTSSEIKLKGLECGAEDYITKPFEAELLTARINNILKSRNSLQRYF 1221

Query: 1220 SKQPQAFAQMLATNPMDKEMLDRAMAIIEQHLDNTDFNVNIFAREMGMARTNLFTKLKAV 1279
                   A     +P  KE L + ++I E+HLDN DFN  + A E+GM+ + L+ K+K++
Sbjct: 1222 YNAVTLQADNQKISPTFKEFLSKCISITERHLDNPDFNTKVLANEVGMSHSALYKKVKSI 1281

Query: 1280 TGQTPNDFILSIRLKKGAVMLRNNPELNITEISDRIGFSSSRYFSKCFKEIYHVSPLAYR 1339
            +G++ N+FI  IRL+K A +L    +  + E + R GF++ +YF + F +++ ++P  Y 
Sbjct: 1282 SGKSINEFIRFIRLRKAAELLIQT-DSRVNEAAFRAGFNNQKYFREQFTKLFEMTPSEYI 1340

Query: 1340 KGEEK 1344
            K   K
Sbjct: 1341 KKYRK 1345