Pairwise Alignments

Query, 1354 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1373 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  715 bits (1845), Expect = 0.0
 Identities = 446/1359 (32%), Positives = 716/1359 (52%), Gaps = 75/1359 (5%)

Query: 26   FSHLTTDDGLSQFSVNSLYIDERGIIWIGTREGLNRYNGNDIKSFKLKKNDPNSLFSNTV 85
            F HL  ++GL+Q SV S+  D RG IW GTR GLN+Y+    K +  ++N+  SL + + 
Sbjct: 48   FKHLNVENGLTQSSVLSIAQDARGFIWFGTRFGLNKYDSKSFKVYYHEENNEKSLSNASF 107

Query: 86   LR-ITGNKNGKVYLLCTDGVAEFDMTTQRF----------KTLLQGNVDAIYYNEK--LY 132
            L  I   K+G + +  ++G+ +++     F           ++    +  I+ ++K  ++
Sbjct: 108  LSSILALKDGTLLIGTSNGLNKYNEGDDNFDHYVHNSKDPNSISNAGISCIFQDKKNRVW 167

Query: 133  IGKREEVFVFNENTN-NFDLYYHLAGKDINLSCLHLDEKKNLWMGTT--------SNGVY 183
            IG    + + + N    F  +     +   +  +  D    LW+ TT         +G  
Sbjct: 168  IGTTNGLNLLSTNGKYKFKRFLDKQKQRQQIYAITEDHNGTLWLSTTYGLVNMRFKDGKI 227

Query: 184  CLSDDKQLSQPITKG---NIASIYEDSSKELWIGSWEEGLYRIR-TNGTIDNFRHDPKNP 239
             L   K  S+ + K    +I ++ ED    LWIG+ + G+ ++  +  TI ++++   NP
Sbjct: 228  HLRYFKDFSEELNKAIDNHITTMVEDRENNLWIGTKQTGVSKLNLSTETITSYQYSSLNP 287

Query: 240  NSICSDFVRSCCEDNLGNLWIGTFHGLNRYDKSTGQFQLYTANDNKPDGLTHSSIWCIVK 299
              I S+ VR    D  G LWIGT HG+N Y+ +T  F         P  L+ +S++ I +
Sbjct: 288  AGISSNNVRKIMMDQEGKLWIGTLHGINIYNPATKNFSSLHNIPEDPTSLSQNSVYDIYQ 347

Query: 300  DEQGTLWLGTYFGGVNYFNPEYEIYTRYKVGDTEKEGLSSPIVGRMTEDKDGNLWICTEG 359
            D QG +W+GTY+G +N   P Y  +  Y+   T   GLSS +V  + ED+  NLWI TEG
Sbjct: 348  DRQGIIWVGTYYGAINMVYPNYTPFKVYR-STTAPNGLSSNVVSSIMEDQHQNLWIGTEG 406

Query: 360  GGVNVYNRKNNTYRWYRHEEGK-NSISHNNVKAIYYDRTEEIMWIGTHLGGLNKLDLRTN 418
             G+N Y+RKN+T+  Y++      S+S N VK++  D+   I W+GTH GGLN     T 
Sbjct: 407  EGLNYYDRKNDTFTRYKNNPNDPKSLSANLVKSVIRDKKNRI-WVGTHYGGLNLFQPETK 465

Query: 419  RFTVYRMKAGDPTTLPSDIVRDIVPYED---KLIIATQNGVCLFNPATGTCEHLFKDTKE 475
             F  Y     D +++ +D +  +  +ED   +  + T  G+  FN  TG     F   + 
Sbjct: 466  TFVRYTKHKNDTSSISNDEITAL--FEDSYGRFWVGTNGGLNSFNSTTGK----FIRNRV 519

Query: 476  GRNIGMVASLYIDKDETLWVSATGEGVYSYRFDTGK-LTHYAHNPSIPNTLSNNNVNNIM 534
                  V  ++ D    LWV AT  G+Y  + D+ + ++  A +P I   L  N +  + 
Sbjct: 520  NGLTDAVHYIFEDAKRCLWV-ATNSGLYQLKKDSQRFISRVAADPEI---LKYNEITCLT 575

Query: 535  QDSNGNLWFSTSGSGLDRYRKESNDFENFDMQKDGLSSDCIYEVFESSIQKGDLLLITNQ 594
             D  G L   TS +GL R     + +       DGL S+ I  + E      +L + T++
Sbjct: 576  TDKAGYLLMGTSHNGLFRLNPGRHSYSRMTTF-DGLPSNNIMGILEDDFN--NLWITTDK 632

Query: 595  GFSQFDYPQKKFYNYGTENGFPLTAVNENALFVTHDGEVFLGGIQGMISFWEKKLHFTPK 654
            G  +++  QK F  Y  ++G P    N  +      G  F GG+ GM+SF+  ++     
Sbjct: 633  GLCKYNPRQKTFKTYNIKDGLPGNEFNYKSFLRDSKGAFFFGGLSGMVSFFPNEIKENKN 692

Query: 655  SYSIILSRLLVNGKEITAGDDTGILEQSIAYTPEISLKADQSMFSIEYATSNFIPANRNE 714
            +  +I + L +  K I      G+L+Q+I+    I+ ++DQ++FSI++   NFI +++N 
Sbjct: 693  TPPVIFTGLKLFNKPIALHTGDGLLKQNISTIKSITFESDQNVFSIDFTLLNFIKSDKNR 752

Query: 715  IVYRLEGFSDEWNHTDRKQTLITYTNLNPGKYTLVIK-SDGDGI---EEARLLIRVLPPW 770
              Y+L GF   WN+ D      +YTNL+PG YTL++K S+ DG+   E + L I++LPP+
Sbjct: 753  YAYKLGGFEKNWNYVDIPSA--SYTNLSPGNYTLMVKGSNNDGLWTNETSTLDIKILPPF 810

Query: 771  YETWWAYLIYTICTVSLLWYLIQNYNSRIKLRESLKYEKKHIEDLEALNQSKLRFFTNIS 830
            Y TWWAYL Y  C  + + ++   Y   + ++  LK EK+       +N+ KL FFTNIS
Sbjct: 811  YRTWWAYLFY-FCAFAAISFVFIRY---LLIKAVLKKEKE-------INEHKLEFFTNIS 859

Query: 831  HEFRTPLTLIVGQVETLLQVQTFTPNIYHKILGIYKNSLQLRELITELLDFRKQEQGHMK 890
            HE RTPLTLIVG ++ L++     P +   +  I  N+ +L  L+TELLDFRK E G M 
Sbjct: 860  HEIRTPLTLIVGPLDKLIENAKDDPALNRDLQPIKNNADRLMNLVTELLDFRKAESGKMA 919

Query: 891  IKVSRHNLVNFLYENYLLFLEYASSKQINFKFNKQSDDIEVWYDQKQMQKVVNNLLSNAL 950
            + VS  ++V F  E +L F   A SK I+++F      IE+++D+ QM+KV+ NLLSNA 
Sbjct: 920  LHVSPGDVVKFCREIFLAFQNMAISKNIDYQFETTQAAIELYFDKVQMEKVMFNLLSNAF 979

Query: 951  KHTKAEDTISINVSQEDKYVIIEIKDTGTGIAAAEIDKIFDRFYQTERLDSLNTGAGTGI 1010
            K T     IS+ +  E + V I+I D G GI       +F  FYQ     +  T  GTG+
Sbjct: 980  KFTPVNGKISLKIETEKQLVNIKICDNGKGIPLENQASLFTNFYQA----NATTTIGTGL 1035

Query: 1011 GLALTKGIIELHHGTIRVESEPGK-----GSRFIITLKSGNQHFTEEQIIRDNA--DANI 1063
            GL+ +K I+ELHHG I  ES P        + F ++LK+G +HF     I D    D  +
Sbjct: 1036 GLSFSKSIVELHHGQISFESTPKNDKAFGNTAFTVSLKTGKEHFNPSDFIPDYVYYDDAL 1095

Query: 1064 QQPPETIVPTVEILPDSEWKEEDNKRIEDAKMLIVEDNESIKQMLVGIFETFYQVTTASD 1123
                 T     E + + +  ++D+ + +   +L+VEDNE ++  +       YQ+    +
Sbjct: 1096 NYSLSTTTQVTEQIKEDDVLQDDSGKNKKNSILLVEDNEDVRTFIKQALSPSYQIYEREN 1155

Query: 1124 GVEALDIIQKDMPSIILSDVVMPRMSGTELCKQVKTDFNTCHIPVVLLTARTAVEHNIEG 1183
            G   L+     +P +I+SDV+MP M G ELC+++KTD  T HIPVVLLTAR+A  H + G
Sbjct: 1156 GATGLECALDLIPDLIISDVMMPVMDGLELCRKLKTDERTSHIPVVLLTARSAYVHQVNG 1215

Query: 1184 LKIGADDYITKPFNTNLLISRCNNLVNSRRLLQEKFSKQPQAFAQMLATNPMDKEMLDRA 1243
             + GAD YI KPFN  +L     NL+N+R  +++KF++      + +  N  ++  L++ 
Sbjct: 1216 FENGADAYIMKPFNLKILELNIQNLLNARETVKKKFAQVITLEPRNMVINTTEQHFLNKI 1275

Query: 1244 MAIIEQHLDNTDFNVNIFAREMGMARTNLFTKLKAVTGQTPNDFILSIRLKKGAVMLRNN 1303
            + +IE  + + DF+V   + E+GM++  L+ K++A+T  + NDFI S+R+K+ A +L+  
Sbjct: 1276 IQLIEDRIADPDFDVPTLSAEVGMSQPVLYKKIRALTDLSVNDFIKSLRIKRAAQLLKQG 1335

Query: 1304 PELNITEISDRIGFSSSRYFSKCFKEIYHVSPLAYRKGE 1342
               NI EI+  +GF+  +YFS  FK+ +  +P  +   +
Sbjct: 1336 TG-NIAEIAYSVGFNDRKYFSSEFKKHFGKTPSEFMSND 1373



 Score = 35.4 bits (80), Expect = 4e-05
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 25  TFSHLTTDDGLSQFSVNSLYIDERGIIWIGTREGLNRYNGND--IKSFKLKKNDPNSLFS 82
           ++S +TT DGL   ++  +  D+   +WI T +GL +YN      K++ +K   P + F+
Sbjct: 600 SYSRMTTFDGLPSNNIMGILEDDFNNLWITTDKGLCKYNPRQKTFKTYNIKDGLPGNEFN 659