Pairwise Alignments

Query, 572 a.a., Outer membrane binding protein for chondroitin sulfate and hyaluronic acid (susD-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 565 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  125 bits (313), Expect = 6e-33
 Identities = 166/623 (26%), Positives = 249/623 (39%), Gaps = 109/623 (17%)

Query: 1   MKALKITIIALLAGFSMVSC--DFLDKEPTKLTPEN-YFNTPAEANSFLTGIYAILS-QP 56
           MK   + I+A +   ++VSC  DFL   P  +      F  P +   FL  IY+ LS  P
Sbjct: 1   MKKAYLYILAAIVIANVVSCKKDFLSSPPVSVVDAKAIFGNPLQTAGFLANIYSELSGSP 60

Query: 57  TFYGGDYMYLVAGDDL----SHYGGSGRGPASTGLICN--NATTSDNAVTAFWYALYSGI 110
             +G    +    D+     ++Y  +     S     N  NA+ +DN         Y  I
Sbjct: 61  DQFGAGTGFTNMCDEAEAGYAYYASNASNVGSFNGSNNPDNASLNDN---------YRKI 111

Query: 111 NRANMFLENIDKVNGFDAGVKEQYIAEARFLRAFYYFNLVECWGDVP----------FKT 160
            + N+ L N D +  F   +K+QYIAEARFLRAF+Y  L++ +G +P           K 
Sbjct: 112 RKCNVMLANKDLMT-FTPALKDQYIAEARFLRAFFYTELLKRFGGMPIITSPIDYEQIKD 170

Query: 161 VSTQSVTNLNIPRTDKQEIYDFIISEMADAAETGLKSASDLAYKPGRISQSTAWGILARV 220
              Q+     I R    E  DFI+ ++ D+A T L  +     + GR++ +    + ARV
Sbjct: 171 FDAQAELKKGIKRNTYAECVDFIVKQL-DSAATVLPWSPPSDLERGRVTAAACAALKARV 229

Query: 221 YLFRAGEHYREGRN-------ATQAEKKDYFERA-SFYAQKVMTAGHKLAANYWDPFIDM 272
            L  A   +    N       A  A  +   + A SF+ +   TAG    + Y   F  +
Sbjct: 230 LLVAASPLFNGSGNELTGYPTADPARWQLALDAARSFFTKN--TAGANWYSLYAGGFDKL 287

Query: 273 CSDKYNTTANESIWEAEFAGNNTSD---------TQAEGRIGNIIGLAGPDLSSKSDVTG 323
            ++  +    E IW  + +G  T +          +  G  G  + L   D         
Sbjct: 288 FTESRDPNNREIIWYKQSSGVTTGNFDPTYFNPPNRLGGFTGYDVSLNLVDKFEMKSGLA 347

Query: 324 AKDPGYGYA----FIYSTPKLYNLYVNNGDTKRFNWSIAPFEYKEAGGKN-TGVTHREFE 378
             D G GY     ++   P+L    + NGD  R N     F  ++   KN  G+      
Sbjct: 348 INDAGSGYNEQQWWLNRDPRLAFSVLRNGDLWRGN--TMEFWARDVSNKNLPGL------ 399

Query: 379 QGKLAEVMSQYGQQRGTYQYADDTEKTTATKNFSRMCGKYRREYEADKKDKNYTSINFPI 438
                     +G Q  T             K F R              D       +  
Sbjct: 400 ---------DWGSQNQT---------GMTIKKFQR-------------PDNGTIVTKYHY 428

Query: 439 LRYADVLLMIAEAENEANNGPTTLAYQCMKEVRERAGLNELP---DMTQEEFRQTVKDER 495
           +R ADV LM+AEA NE   GPT   Y  +  VR RA +   P    +++++ R  +++ER
Sbjct: 429 IRLADVYLMLAEAANEV-GGPTAEVYTAINTVRNRATVLMPPLPAGLSKDQMRLRIQNER 487

Query: 496 AMELCFEYTRRFDLIRW--GEYVKN--MRALVTEAQSGNNWTQGPTNVYT--YFNISSTY 549
           A+EL FE  R FD+ RW   E   N   +  V E ++G+  T    N YT          
Sbjct: 488 AVELAFENQRYFDVRRWKIAEQTDNGPFQGFVIE-KNGSTITH---NRYTLEVRKFQPRM 543

Query: 550 NYFPIPDAEMSVNKDITQNNPGW 572
             +PIPD E+    +I Q NPG+
Sbjct: 544 YLYPIPDVEIFKGANIVQ-NPGY 565