Pairwise Alignments

Query, 314 a.a., putative nifR3 family TIM-barrel enzyme with dihydrouridine synthase domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 341 a.a., tRNA-U20-dihydrouridine synthase from Sphingomonas koreensis DSMZ 15582

 Score = 79.7 bits (195), Expect = 9e-20
 Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 2/200 (1%)

Query: 67  QLIASSAEKAEVILSLFIEKGYQEVDINLGCPFPLLAKRHNGSGILPYPEEVKALLSIVT 126
           QL+  +  +      L  ++G   +DIN+GCP   +     GS ++  P+    L+    
Sbjct: 76  QLVGCTPYEMGEAAKLNEDRGAAIIDINMGCPVRKVTNGDAGSALMRVPDLAAKLIEACV 135

Query: 127 RYPQISFSVKMRLGW-EQPDECLALAPILNDLPLRQITMHPRLGKQGYKGEVDLQGFSAF 185
           +  ++  +VKMR+GW         LA +  D+  + IT+H R   Q YKG  D       
Sbjct: 136 KAVKVPVTVKMRMGWCHDSLNAPELARVAEDIGAQMITVHGRTRNQMYKGSADWAFVRKV 195

Query: 186 REVCQLPLVYNGDIHNLEDIQRISTQFPSLAGIMIGRGLLANPALALEYKENRTLAPDEM 245
           ++   +P++ NGDI + +D  R + +     G+MIGRG    P L  +  +  T   +  
Sbjct: 196 KDAVSIPVIVNGDICSPDD-ARTALEQSGADGVMIGRGAYGRPWLLRQVMDALTGQGERE 254

Query: 246 RDRLKSMHKSVYNNYDVLLE 265
              +   +  +  +Y  +L+
Sbjct: 255 DPSIDEQYALIAEHYATMLD 274