Pairwise Alignments

Query, 1366 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (331), Expect = 2e-34
 Identities = 109/396 (27%), Positives = 203/396 (51%), Gaps = 33/396 (8%)

Query: 826  RQQREELYESKLRFFTNITHEFCTPLTLINGPCEKILSYSRVDSYVRKYASMIQQNALKL 885
            R++ EE    +  F   ++HE  TPL  + G   ++L  + ++   R++ +++  +   L
Sbjct: 470  RREAEESARVRAEFLAKMSHELRTPLNGVLG-VSQLLKRTPLNDEQREHVAVLCSSGEHL 528

Query: 886  NALILELIEFRRLETGNKILKIKHVPVTEQIRTIAESFGELAESRKLNYRLQ--IEDGVF 943
             A++ ++++F RLE G   ++     + E +  I   +  L   + L   +   I     
Sbjct: 529  LAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAI 588

Query: 944  WNTDVSCLSKIVNNLISNAFKYTPENGSITVELR-IEGE---QLCIRVSNTGKGIKEADL 999
              +D   +++I+ NL++NA K+T + GSI VEL+ IEG+   QL I+V +TG GI+E DL
Sbjct: 589  VRSDQIRINQILFNLLNNAIKFTHQ-GSIRVELQLIEGDPLAQLVIQVVDTGIGIREQDL 647

Query: 1000 TKIFDRYKILDNFEVQNKNGISPRNGLGLAICHSMVNLLNGQIQVSSIPNEVTTFDVWLP 1059
            T IF+ +   ++   +   G    +GLGL I HS+V +L+GQ+ VSS     T F++ LP
Sbjct: 648  TVIFEPFMQAESTTTREYGG----SGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLP 703

Query: 1060 VMEVTVDNEDEKVAEELVLSSDEQAVELKNSSVEFDKNKQTIMIIDDDPSMLWFVTEIFV 1119
            +  V    E     ++L+ + D Q +        FDK  + +++ D+  +   F+ + F 
Sbjct: 704  IELV----EKPDAPQQLLPAPDPQPL--------FDKTLRVLLVEDNHTNA--FIAQAFC 749

Query: 1120 GAY--NVVSLGSAEEALKQLGIQLPDLIISDVMMPGMDGMSFAKKIKSDKLLSRIPLILL 1177
              Y  +V  +    +A+++L I   DL++ D  +P +DG+   + IK    +  +P+++ 
Sbjct: 750  RKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKK---VLHLPVVVY 806

Query: 1178 SALNNIDEQTRG--IESGAEAYITKPFNVEYLEKVV 1211
            +   +  E+TR     +GAE  + KP   + L K +
Sbjct: 807  ACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKAL 842