Pairwise Alignments

Query, 1366 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  145 bits (366), Expect = 2e-38
 Identities = 114/418 (27%), Positives = 204/418 (48%), Gaps = 24/418 (5%)

Query: 826  RQQREELY---ESKLRFFTNITHEFCTPLTLINGPCEKILSYSRVD-SYVRKYA-SMIQQ 880
            R+Q +EL    + K  F    +HE  TPL  + G  E ++S +    S   KY   +I  
Sbjct: 447  RKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALISGANGPISAAHKYQLDIIIS 506

Query: 881  NALKLNALILELIEFRRLETGNKILKIKHVPVTEQIRTIAESFGELAESRKLNYRLQIED 940
            +  +L  L+ +L+++ ++  G   ++   V ++   R + E    L   + L    Q+ +
Sbjct: 507  SGQRLATLVDDLLDYHKMRYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLRIINQVSE 566

Query: 941  GVFW-NTDVSCLSKIVNNLISNAFKYTPENGSITVELRIEGEQLCIRVSNTGKGIKEADL 999
               W + D   L +++ NLI NA KYT E G I +      +++ ++V +TG+GI    L
Sbjct: 567  QPVWVSADPQRLEQVLYNLIGNAIKYTSE-GKIVISATYIDDKVRVQVVDTGQGIPAEQL 625

Query: 1000 TKIFDRYKILDNFEVQNKNGISPRNGLGLAICHSMVNLLNGQIQVSSIPNEVTTFDVWLP 1059
              IF+      +   + + G     GLGL+I   ++ L++G + VSS P   TTF   LP
Sbjct: 626  EHIFEPLIQAGHDASRYRQGA----GLGLSISRQLIELMHGTLYVSSQPMVGTTFSFTLP 681

Query: 1060 VMEVTVDNEDEKVAEELVLSSDEQAVELKNSSVEFDKNKQT------IMIIDDDPSMLWF 1113
            +      +E+E     L      QA E+ +S +    N         +++ DD+P  L  
Sbjct: 682  LA-----SEEEIAQARLTELPHFQAPEVLDSELPEQSNLPENEHGPLLLVADDEPVNLRV 736

Query: 1114 VTEIF-VGAYNVVSLGSAEEALKQLGIQLPDLIISDVMMPGMDGMSFAKKIKSDKLLSRI 1172
            +     +  Y V +     + L+ +  + P+L++ D+MMPGM G    +K++     + +
Sbjct: 737  LDSFLRLEGYRVHTAQDGHQVLEAIKREKPELVLLDIMMPGMSGYQVCEKLRQTYDHAEL 796

Query: 1173 PLILLSALNNIDEQTRGIESGAEAYITKPFNVEYL-EKVVRRLLQREEDLKEYYSSVL 1229
            P+I+L+ALN  D++ RG E+GA  Y++KPFN + L  ++V  L   + +L+   ++ L
Sbjct: 797  PIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELAARIVAHLTASKAELRRIENAQL 854