Pairwise Alignments

Query, 949 a.a., DNA polymerase I (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 937 a.a., DNA polymerase I from Phaeobacter inhibens DSM 17395

 Score =  601 bits (1550), Expect = e-176
 Identities = 370/972 (38%), Positives = 544/972 (55%), Gaps = 75/972 (7%)

Query: 7   LFLLDAYALIYRAYYAFIKNPRINSKGFNTSAILGFVNTLEEVLK----KENPSHIGVAF 62
           L L+D  A I+RAY+A     R  S G    A+ GF N L   ++     + P+H+ V F
Sbjct: 12  LHLIDGSAFIFRAYHALPPLTR-KSDGLPIGAVAGFCNMLHRYVEGNTGPDAPTHVAVIF 70

Query: 63  DPSGPTFRHEAFEQYKAQREETPEAIRLSVPIIKDIIHAYRIPILEVAGYEADDVIGTLA 122
           D    TFR++ ++QYKA RE  PE +R  +P+ +    A+ I   E  G+EADD+I TLA
Sbjct: 71  DKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEQEGFEADDIIATLA 130

Query: 123 TEAGRQGITTYMMTPDKDYGQLVTDNVFMYRPKHTGGFEVMGIEEVKAKFDIQSPAQVID 182
            +A   G    +++ DKD  QLV   V M         +  G+ E   KF +  P +V+D
Sbjct: 131 CQARDAGGRVTIISSDKDLMQLVGGGVEMLDAMKNKRIDTDGVFE---KFGV-GPDRVVD 186

Query: 183 MLGLMGDASDNIPGCPGVGEKTAQKLIAEFGSIENLLEHTDQLKGALK--TKVETNKELI 240
           +  L GD+ DN+PG PG+G KTA  LI E+GS+E+LL   +++K   +  T +E N+  I
Sbjct: 187 VQALAGDSVDNVPGAPGIGIKTAALLINEYGSLEDLLNRAEEIKQPKRRQTLIE-NRAQI 245

Query: 241 TFSKFLATIKIDVPIQLEMDKLVREQADEDSLRQIFEELEFRTLIDRVLKK-ENSAGGVT 299
             SK L  +  ++ +   +D L     D D L     E+EFRTL  RV  +    A  + 
Sbjct: 246 ELSKQLVQLDNNMELDFTLDDLGVRDPDADHLLSFLAEMEFRTLSKRVADQLGKEAPAIV 305

Query: 300 MATGSKTATAKSAP-SPLPLFPEEGGAIQGDLFANFTGNEAGEAKKSNLETLETLNCDYQ 358
            A    T TA++A  + +P        ++          +AG  KK  ++  E       
Sbjct: 306 DAPAQSTDTAEAATVADMPFDSSSYECVR----------DAGALKKWVIQIRER------ 349

Query: 359 LIDTEKKRAEIIQKLLTSKILSLDTETTGTEPMDAELVGMSFSITENQAFYVPVP----- 413
                               +++DTETTG + M  +LVG+S  +   +A Y+P+      
Sbjct: 350 ------------------GWVAVDTETTGFDEMVVDLVGISLCVEPGRACYIPLTHKSGS 391

Query: 414 -----------DNREEALKIVNEFRPVFENENSLKVGQNIKYDMIVLENYGVQVKGALFD 462
                      D +      ++  +PV E+ + LK+GQN+KYD  +    G+ V   + D
Sbjct: 392 SDDLFGSDDLADGQMPLQDALDLLKPVLEDNSILKIGQNMKYDAKIFARRGIDV-APIDD 450

Query: 463 TMIAHYVLQP-ELRHGMDYLAEIYLHYQTIHIDELIGPKGKNQKNMRDLDPKDIYRYACE 521
           TM+  Y +   +  HGMD L+E YL++  I I  L+G  GK+      +   D   YA E
Sbjct: 451 TMLMSYAMHAGQHGHGMDTLSERYLNHTPIPIKPLLGT-GKSAITFDRVPIDDAVAYAAE 509

Query: 522 DADVTLKLKNVLEKELKENDAERLFYDIEMPLVPVLVNIERNGVLLDTEALKQSSVHFTA 581
           DAD+TL+L  + + +L ++    ++  +E PLVPVL  +ER G+ +D + L + S  F  
Sbjct: 510 DADITLRLWQLFKPQLHQSGVTTVYETLERPLVPVLARMEREGIKVDRDTLSRMSNAFAQ 569

Query: 582 QMQRIEQEIYELAGETFNIASPKQVGEVLFDKLRIIEKAKKTKTGQYVTSEEVLESLRHK 641
           +M  +E EI+ELAG+ FN+ SPKQ+GE+LFDKL + E  KK KTG Y T  ++LE L  +
Sbjct: 570 KMAGLEAEIHELAGQNFNVGSPKQLGEILFDKLGM-EGGKKGKTGAYATGADILEDLATE 628

Query: 642 HPVVEKILEHRGLKKLLGTYIDALPQLINPRTGRVHTSFNQTVTSTGRLSSSNPNLQNIP 701
           H +   +L+ R L KL  TY DAL   IN  TGRVHTS+ QT  +TGRL+S++PNLQNIP
Sbjct: 629 HALPGLVLDWRQLSKLKSTYTDALQDHINAETGRVHTSYVQTGANTGRLASTDPNLQNIP 688

Query: 702 IRDENGKEIRKAFIPDEGCLFFSADYSQIELRIMAHLSEDKNMIDAFLSNHDIHAATAAK 761
           IR E G+ IR+AF+P+EG +  + DYSQIELRI+AH++    +  AF    DIHA TA++
Sbjct: 689 IRSEEGRRIREAFVPEEGNVLLALDYSQIELRILAHVAGIDTLKQAFAEGQDIHALTASE 748

Query: 762 IYKIDLKDVDSDMRRKAKTANFGIIYGISVFGLAERMNVDRKEAKELIDGYFETYPSVKA 821
           ++ + L+++ SD+RR+AK  NFG+IYGIS FGLA  + + R EA+  ID YFE +P ++ 
Sbjct: 749 MFNVPLEEMTSDIRRQAKAINFGVIYGISGFGLARNLRIPRAEAQGFIDRYFERFPGIRR 808

Query: 822 YMEKSIQIAQEKGYVETIFHRKRFLPDINSRNAVVRGYAERNAINAPIQGSAADIIKVAM 881
           YM++++  A+E G+V+T+F RK   P+I+++     G+A+R AINAPIQG+AAD+I+ AM
Sbjct: 809 YMDETVAFAKEHGHVQTLFGRKIHTPEISAKGPRA-GFAKRAAINAPIQGTAADVIRRAM 867

Query: 882 ARIYQRFQTEGIQAKMILQVHDELNFSVPVNEKERVEEIVIEEME----HAYRMHVPLKA 937
            R+        + A+M+LQVHDEL F VP    E   E   + ME     A  + V L  
Sbjct: 868 IRMPAAI--AHLPARMLLQVHDELLFEVPEAAVEDTIETASQVMETAADPAVHLDVKLVV 925

Query: 938 DCGWGKNWLEAH 949
           D G G+NW EAH
Sbjct: 926 DAGRGQNWAEAH 937