Pairwise Alignments

Query, 949 a.a., DNA polymerase I (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 868 a.a., DNA polymerase I from Marinobacter adhaerens HP15

 Score =  633 bits (1632), Expect = 0.0
 Identities = 370/906 (40%), Positives = 529/906 (58%), Gaps = 64/906 (7%)

Query: 56  SHIGVAFDPSGPTFRHEAFEQYKAQREETPEAIRLSVPIIKDIIHAYRIPILEVAGYEAD 115
           S + V FD  G TFRH+ +E+YKA R   PE +   +  I +I+ A  +P+L V G EAD
Sbjct: 15  SKMVVVFDAKGKTFRHDLYEEYKANRPPMPEDLACQIEPIHEIVKAMGLPLLTVTGVEAD 74

Query: 116 DVIGTLATEAGRQGITTYMMTPDKDYGQLVTDNVFMYRPKHTGGFEVMGIEEVKAKFDIQ 175
           DVIGTLA EA  +GI   + T DKD  QLV+D+V +         +  G+ E   KF + 
Sbjct: 75  DVIGTLANEATSKGIDVVVSTGDKDMAQLVSDHVTLINTMTETRMDRDGVVE---KFGV- 130

Query: 176 SPAQVIDMLGLMGDASDNIPGCPGVGEKTAQKLIAEFGSIENLLEHTDQLKGALKTKVET 235
           +P Q++D L L+GD  DNIPG    G KTA K +  + +++N++EH D++KG +   +  
Sbjct: 131 TPEQIVDYLALVGDKVDNIPGVNKCGPKTAVKWLQSYDNLDNVIEHADEIKGKIGEYLRD 190

Query: 236 NKELITFSKFLATIKIDVPIQLEMDKLVREQADEDSLRQIFEELEFRTLIDRVLKKENSA 295
             E +  S+ LATI+ DV +   ++ L   + D+  L ++F E EFR+ I  + + E+S+
Sbjct: 191 ATETLPLSRELATIRTDVELDFGLEDLKLREQDDQQLLELFREYEFRSWIAELEEDESSS 250

Query: 296 GGVTMATGSKTATAKSAPSPLPLFPEEGGAIQGDLFANFTGNEAGEAKKSNLETLETLNC 355
                   S        P P                      E GE              
Sbjct: 251 S-------SNARAGDETPKP----------------------ETGEK------------- 268

Query: 356 DYQLIDTEKKRAEIIQKLLTSKILSLDTETTGTEPMDAELVGMSFSITENQAFYVPV--- 412
           DY +I  +K+  + +++L  +++ + DTETT    MDAE+VG+SF++   +A YVP+   
Sbjct: 269 DYSIITDQKELDQWLERLGAAELFAFDTETTSLRYMDAEIVGVSFAVKPGEAAYVPLGHD 328

Query: 413 ----PDNREEALKIVNEFRPVFENENSLKVGQNIKYDMIVLENYGVQVKGALFDTMIAHY 468
               P+  +   +++++ +P+ EN +  KVGQN+KYD  VL N+G+ ++G   DTM+  Y
Sbjct: 329 YMGAPEQLDRD-QVLDQLKPLLENPDLAKVGQNLKYDKNVLANHGITLEGIAEDTMLESY 387

Query: 469 VLQP-ELRHGMDYLAEIYLHYQTIHIDELIGPKGKNQKNMRDLDPKDIYRYACEDADVTL 527
           VL     RH MD LA  YL  +T   + + G KG  Q     +D +    YA EDAD+TL
Sbjct: 388 VLNSVATRHDMDSLAMYYLGEKTTSFESIAG-KGAKQLTFNQIDLEKAAPYAAEDADITL 446

Query: 528 KLKNVLEKELKENDAERLFY-DIEMPLVPVLVNIERNGVLLDTEALKQSSVHFTAQMQRI 586
           +L   L  +LKE       Y DI++PLVPVL  +E+ G L+    L+Q S     +M  +
Sbjct: 447 RLHQTLRPKLKETGKLAAVYEDIDLPLVPVLSRMEQRGTLISASTLRQHSQELAERMAEL 506

Query: 587 EQEIYELAGETFNIASPKQVGEVLFDK--LRIIEKAKKTKTGQYVTSEEVLESLRHKHPV 644
           E+E +E+AGETFN+ S KQ+  + +DK  L +I+K ++ +  Q   S     S  + +  
Sbjct: 507 EKEAHEVAGETFNLGSTKQLQAIFYDKMGLPVIKKPQRARRQQ--RSRCFRNSPTNTNCR 564

Query: 645 VEKILEHRGLKKLLGTYIDALPQLINPRTGRVHTSFNQTVTSTGRLSSSNPNLQNIPIRD 704
           V  ILEHR L KL  TY D LP+LI+ RTGRVHTS++Q VT+TGRLSSS PNLQNIPIR 
Sbjct: 565 V--ILEHRSLSKLKSTYTDTLPELIHHRTGRVHTSYHQAVTATGRLSSSEPNLQNIPIRS 622

Query: 705 ENGKEIRKAFIPDEGCLFFSADYSQIELRIMAHLSEDKNMIDAFLSNHDIHAATAAKIYK 764
           E G+ IR+AFI  EG    +ADYSQIELRIMAHLS DK ++ AF    DIH ATA++++ 
Sbjct: 623 EQGRRIRQAFIAPEGYKLVAADYSQIELRIMAHLSGDKGLLKAFEKGEDIHKATASEVFG 682

Query: 765 IDLKDVDSDMRRKAKTANFGIIYGISVFGLAERMNVDRKEAKELIDGYFETYPSVKAYME 824
           + L DV SD RR AK  NFG+IYG+S FGL+ +++V+RK A+E ID YFE YP V  YM+
Sbjct: 683 VSLDDVSSDQRRSAKAINFGLIYGMSAFGLSRQLDVERKLAQEYIDRYFERYPGVLKYMD 742

Query: 825 KSIQIAQEKGYVETIFHRKRFLPDINSRNAVVRGYAERNAINAPIQGSAADIIKVAMARI 884
              + A + G+VET+F R+ +LP+IN+RN  ++  AER AINAP+QG+AADIIK AM  +
Sbjct: 743 NIRKQAHDDGFVETLFGRRLYLPEINARNKQLQQAAERTAINAPMQGTAADIIKRAMVDV 802

Query: 885 YQRFQTE-GIQAKMILQVHDELNFSVPVNEKERVEEIVIEEMEHAYRMHVPLKADCGWGK 943
                 E   +A+M +QVHDEL   V  +  +++   + + M  A  + VPL  + G G 
Sbjct: 803 ENWLLKEHADEARMTMQVHDELILEVKESALDKIRSGLEKRMSAAAELDVPLLVEAGVGD 862

Query: 944 NWLEAH 949
           NW EAH
Sbjct: 863 NWDEAH 868