Pairwise Alignments

Query, 949 a.a., DNA polymerase I (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 937 a.a., DNA polymerase I from Cupriavidus basilensis FW507-4G11

 Score =  650 bits (1678), Expect = 0.0
 Identities = 382/965 (39%), Positives = 553/965 (57%), Gaps = 47/965 (4%)

Query: 2   ESDNKLFLLDAYALIYRAYYAFIKNPRI-NSKGFNTSAILGFVNTLEEVLKKENPSHIGV 60
           +S   L L+D  + +YRAY+A    P + N++G  T AI G +N L ++       +   
Sbjct: 3   DSPKTLLLVDGSSYLYRAYHAL---PDLRNAEGLPTGAIYGMINMLRKLRSDFPAEYSAC 59

Query: 61  AFDPSGPTFRHEAFEQYKAQREETPEAIRLSVPIIKDIIHAYRIPILEVAGYEADDVIGT 120
            FD  G TFR + +  YK  R   PE +   +  I + + A   PI+ V G EADDVIGT
Sbjct: 60  VFDAKGKTFRDDLYPAYKEHRPSMPEDLAKQIEPIHEAVRALGWPIVVVEGVEADDVIGT 119

Query: 121 LATEAGRQGITTYMMTPDKDYGQLVTDNVFMYRPKHTGGFEVMGIEEVKAKFDIQSPAQV 180
           LA  A  +G+ T + T DKD  QLV  +V +    +T   E++    V AKF +  PA++
Sbjct: 120 LARRATAEGMRTVVSTGDKDLAQLVDGHVTLV---NTMSGEILDPPGVAAKFGVP-PARI 175

Query: 181 IDMLGLMGDASDNIPGCPGVGEKTAQKLIAEFGSIENLLEHTDQLKGALKTKVETNKELI 240
           +D L L+GDA DN+PG P VG KTA K + E+G++++++ +   +KG +   +      +
Sbjct: 176 VDYLSLIGDAVDNVPGVPKVGPKTAVKWLTEYGTLDDVMANAPGIKGVVGENLRNTLAWL 235

Query: 241 TFSKFLATIKIDVPIQ---LEMDKLVREQADEDSLRQIFEELEFRTLIDRVLKKENSAGG 297
             ++ L T+K D  +     +  +L     D+D L   F    F+T +         A G
Sbjct: 236 PKARELVTVKTDCDLTSSLADFHRLEGGSEDKDKLIDFFARYGFKTWL-------REATG 288

Query: 298 VTMATGSKTATAKSAPSPLPLFPEEGGAIQGDLFANFTGNEAGEAKKSNLETLET-LNCD 356
            ++      A A +AP      P  GGA          G +AG A+    ++        
Sbjct: 289 ESLPNPRAQARASAAP------PAAGGAA--------AGADAGPAQGGLFDSAPAPAQIR 334

Query: 357 YQLIDTEKKRAEIIQKLLTSKILSLDTETTGTEPMDAELVGMSFSITENQAFYVPVPDNR 416
           Y+ + TE      ++++ T+ ++S+DTETT  EP+ A+LVG+S SI   +A Y+PV    
Sbjct: 335 YETVATEAALEAWMRRIETAPLVSIDTETTSLEPLQAQLVGISLSIEPGEACYIPVAHRG 394

Query: 417 EEAL-----------KIVNEFRPVFENENSLKVGQNIKYDMIVLENYGVQVKGALFDTMI 465
            + +            ++   R   E+ +  KVGQN+KYD  V  N+GV ++G + DTM+
Sbjct: 395 PDVVGLEAYGQLTREAVLARMRAWLEDPSRGKVGQNLKYDSHVFANHGVSLRGIVHDTML 454

Query: 466 AHYVLQPELRHGMDYLAEIYLHYQTIHIDELIGPKGKNQKNMRDLDPKDIYRYACEDADV 525
             YVL     HGMD LAE  L  +TI  +E+ G KG +Q     +D      YA EDADV
Sbjct: 455 QSYVLASHRNHGMDSLAERLLGLKTISYEEVCG-KGASQIGFDQIDIARATEYAAEDADV 513

Query: 526 TLKLKNVLEKELKENDAERLFYD-IEMPLVPVLVNIERNGVLLDTEALKQSSVHFTAQMQ 584
           TL+L   +  +++        Y+ IEMP+  VL  IERNGVL+D E L   S     +M 
Sbjct: 514 TLRLHRNMYPQVEALPGVHYVYEKIEMPVSVVLQKIERNGVLIDAERLGAQSTQLGQRML 573

Query: 585 RIEQEIYELAGETFNIASPKQVGEVLFDKLRIIEKAKKTKTGQYVTSEEVLESLRHKHPV 644
            +EQ  YE AG+ FN+ SPKQ+GE+LF ++++    KKT +G   T EEVL+ L   +P+
Sbjct: 574 TLEQAAYEAAGQPFNLGSPKQIGEILFGQMKL-PVVKKTASGAPSTDEEVLQKLAEDYPL 632

Query: 645 VEKILEHRGLKKLLGTYIDALPQLINPRTGRVHTSFNQTVTSTGRLSSSNPNLQNIPIRD 704
            + +L++RGL KL  TY D LP+++NP TGRVHTS+ QT   TGRL+S+ PNLQNIP+R 
Sbjct: 633 PKLLLDYRGLAKLKSTYTDKLPKMVNPATGRVHTSYGQTTAVTGRLASTEPNLQNIPVRT 692

Query: 705 ENGKEIRKAFIPDEGCLFFSADYSQIELRIMAHLSEDKNMIDAFLSNHDIHAATAAKIYK 764
           E G+ IR+AFI   G +  SADYSQIELRIMAH+S D+N++ +F    D+H ATAA+I+ 
Sbjct: 693 EEGRRIREAFIAGPGNVIVSADYSQIELRIMAHISGDENLMRSFAEGEDVHRATAAEIFG 752

Query: 765 IDLKDVDSDMRRKAKTANFGIIYGISVFGLAERMNVDRKEAKELIDGYFETYPSVKAYME 824
           +    V S+ RR AK  NFG+IYG+S FGLA  + ++R+ AK  ID YF  YP V  YME
Sbjct: 753 VAPDAVSSEQRRYAKVINFGLIYGMSAFGLAGNLGIEREAAKHYIDRYFMRYPGVARYME 812

Query: 825 KSIQIAQEKGYVETIFHRKRFLPDINSRNAVVRGYAERNAINAPIQGSAADIIKVAMARI 884
           ++ Q A+E+G+VET+F R+ +LPDIN  N   R  AER AINAP+QG+AAD+IK++M  +
Sbjct: 813 ETRQTAREQGFVETVFGRRLWLPDINGGNGPRRQGAERAAINAPMQGTAADLIKLSMIAV 872

Query: 885 YQRFQTEGIQAKMILQVHDELNFSVPVNEKERVEEIVIEEMEHAYRMHVPLKADCGWGKN 944
               + +G+  + ++QVHDEL   VP  E ERV+  + E M +   + VPL A+ G G N
Sbjct: 873 QDWLERDGLGTRQVMQVHDELVLEVPQAELERVKVKLPELMCNVAELRVPLVAEVGSGSN 932

Query: 945 WLEAH 949
           W EAH
Sbjct: 933 WEEAH 937