Pairwise Alignments

Query, 489 a.a., putative N6-adenine-specific DNA methylase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 390 a.a., putative N6-adenine-specific DNA methylase from Dechlorosoma suillum PS

 Score =  251 bits (642), Expect = 2e-71
 Identities = 144/390 (36%), Positives = 216/390 (55%), Gaps = 5/390 (1%)

Query: 5   FEMIAKTFQGLEEILAEELTTLGANDIQIGRRMVSFTGDKRMMYKANFCLRTAIRILKPI 64
           F++ A   +GLE +LAE+LT  GA+DI+I    V+  G    +Y+ N   R A R++  +
Sbjct: 2   FKLFATCPRGLEALLAEDLTAAGASDIRIVASGVACRGTWETVYRTNLNSRIATRLMLQL 61

Query: 65  KNFTAKDADEVYNQIQAIPWEEYLDVNKTFAIDAVVFSEEFRHSKFVSYKVKDAIVDYFR 124
                   +++Y Q   I W  + DV++T  +         +  +F++ ++KDA+ D FR
Sbjct: 62  SFGKYLKEEDIYKQASKIDWPRHFDVSRTIRVYVTAIKSPLKSLEFITLRIKDAVCDVFR 121

Query: 125 KKTGKRPSVRINNPDVLLNIHIAQTTCTLSLDSSGESLHRRGYRQEQVDAPLNEVLAAGM 184
            + G+RPSV    P+V ++  +    CTL LD++G  L++RGYRQ+ V+APL E LAAG+
Sbjct: 122 DQCGERPSVDTREPEVRIHAFLTAEDCTLYLDTTGAPLYQRGYRQKTVEAPLKENLAAGI 181

Query: 185 LLMTGWRGECDLIDPMCGSGTIPIEAALIARNIAPGVFRKGFAFEKWVDFDSEMFDEIYN 244
           L + GW+    L+DPMCGSGT  +EAA    NIAPG  R+ FAFE    FD++++  + N
Sbjct: 182 LRLAGWQPGTVLLDPMCGSGTFLLEAAQQVCNIAPGA-RRSFAFENLKGFDAQLWQRLKN 240

Query: 245 DDSQ-EREFTHK--IYGYDNNPKANEIATHNIKAAGVSKDVTLKLQPFQQFEQPQEKSII 301
              Q ER+   K  ++G D +P A   A  N+  AG+   V L +    +   P E  ++
Sbjct: 241 AAVQGERKPAGKPTLFGRDVSPSAYRSALANLDRAGLLPAVDLAVGDILETAPPPEAGLM 300

Query: 302 VMNPPYGERISTND-LLGLYQMIGERLKHAFVGNEAWVLSYREECFDQIGLKPSKKVPLF 360
           V NPPYGER+   D LL  Y  +G  LK  + G   + L+        +GLKP KK PL+
Sbjct: 301 VCNPPYGERLEELDNLLAFYPQLGTALKQKYAGWTCYFLTADPALPKGVGLKPGKKTPLY 360

Query: 361 NGALECEFRKYEIFDGKYKEFKSQEGEGEE 390
           NGALEC   ++++  G  +  K  E E  E
Sbjct: 361 NGALECRLYQFKMVAGFNRRKKPGEEESGE 390