Pairwise Alignments

Query, 159 a.a., conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 211 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 44.7 bits (104), Expect = 1e-09
 Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 19/142 (13%)

Query: 1   MDAFIDSTIQLLIEWGLPGLFISALLAGSIVPFSSELVL------VALVKLGLPPTACIL 54
           +D +ID T+  L  WG+ GL +   L     P  SEL++       A  +L L P   I+
Sbjct: 1   VDRWIDMTMDRLGYWGI-GLLM--FLENLFPPIPSELIMPLAGYSAAQGQLALFPA--IV 55

Query: 55  AATLGNTAGGMTCYYMGR-LGK---ISWIEKYFK---VKKEKVDKMVKFLQGKGALMAFF 107
           A  +G   G +  YY+GR LG+   + W+E++ +   ++  ++ +  ++    G  + F+
Sbjct: 56  AGVVGTMVGALPWYYLGRWLGEDRILLWLERHGRWLGIRPHELQRSRRWFNRHGRKVVFW 115

Query: 108 A-FLPAIGEVISIALGFMRSNI 128
              +P I  +IS+  GF R  +
Sbjct: 116 GRLIPGIRTLISLPAGFERMRL 137