Pairwise Alignments

Query, 289 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 288 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 72.8 bits (177), Expect = 8e-18
 Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 17/177 (9%)

Query: 113 KIKNLLEEAQRGIYF--PAG----CS-PRLVDLLESIPVET---GVDQITSFLQLLKEMA 162
           ++   L E++   YF  P G    CS  RL+  L+S P+E    G   +   L  L  + 
Sbjct: 114 RVPQALNESRLPGYFIAPTGEAIECSIHRLLQALQS-PLEAEALGEAMVLEILYRLLALP 172

Query: 163 NVASRSVLSTSDFENDIIYDGSRIDKIIVYLNKNYTRQIDLNEISSLAAMNPAAFCRFFK 222
           N A    L+ S          SRIDK + YL+K+Y   I+++++++L  M+P+AF R FK
Sbjct: 173 NAAPLYALALSHTRL------SRIDKALSYLHKHYAASIEVDQLAALVNMSPSAFHRCFK 226

Query: 223 SKTGKSFKNYILEMRIGYACKLLLMGDMNISQISVECGFDTISHFNKSFKKHTGFTP 279
             T  S   Y+ ++R+  A +LL    + + Q ++E G+++ + F++ FK++   +P
Sbjct: 227 EVTASSPIQYLKKVRLNKAKELLQRPGVKVKQAAIEVGYESPAQFSREFKRYFSHSP 283