Pairwise Alignments

Query, 367 a.a., GTP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 366 a.a., GTP-dependent nucleic acid-binding protein EngD (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  387 bits (993), Expect = e-112
 Identities = 197/371 (53%), Positives = 266/371 (71%), Gaps = 9/371 (2%)

Query: 1   MALQCGIVGLPNVGKSTLFNCLSNAK-AQAANFPFCTIEPNVGVITVPDERLNALAELVH 59
           MAL  GIVGLPNVGKSTLFN L+ A+ A+AAN+PFCTIEPN   + VPD R++ L E+  
Sbjct: 1   MALSIGIVGLPNVGKSTLFNALTKAQNAEAANYPFCTIEPNKATVAVPDARIDKLTEMAK 60

Query: 60  PQRIVPTTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDDNVTHVDGSV 119
           PQ+ +  TV+ +DIAGLV+GASKGEGLGN+FLANIRE  AI+ V+RCFDD+N+THVDG++
Sbjct: 61  PQKTISATVDFIDIAGLVRGASKGEGLGNQFLANIRECAAILEVVRCFDDENITHVDGAI 120

Query: 120 NPVRDKEIIDYELQLKDLETIESRIQKVQKQAQTGGDKAAKQAYDVLIQYKDALEQGKSA 179
           +P+RD E I+ EL L D+++ E R  ++ K ++   DK AK A D L +  + +  G  A
Sbjct: 121 DPIRDIETIETELLLADIQSAEKRYDRLSKMSKF--DKDAKAASDELGRLLEHMNAGNPA 178

Query: 180 RTVTFETKDE---QKIAHELFLLTSKPVMYVCNVDEASAVNGNKYVDMVREAVKDENAEI 236
              TFE KD    ++   E+ L+T+K V+Y  NVDEA+    N +V  VRE  +    ++
Sbjct: 179 S--TFEGKDNDLFKQAMREMGLITAKKVIYCANVDEANLDGTNDHVRRVRELAEQRGCDM 236

Query: 237 LVVAAKTEADIAELETYEDRQMFLAEVGLEESGVARLIKSAYKLLNLETYFTAGVQEVRA 296
           +V+ AK E ++  L   E  +M LA  G++ESG+  +I++ Y  L L +YFT G +EVRA
Sbjct: 237 VVICAKIEEELQGLSDEEQAEM-LASYGIKESGLVSIIRTGYHTLGLASYFTVGEKEVRA 295

Query: 297 WTYEKGWKAPQCAGVIHTDFEKGFIRAEVIKYDDYIQYGSEAAVKEAGKLGVEGKEYVVQ 356
           WT ++GWKAP CAGVIHTDFE+GFIRAEVI YDDY+++G+EAA + AG L VEGKEYV++
Sbjct: 296 WTIQQGWKAPACAGVIHTDFERGFIRAEVIGYDDYVKHGTEAACRSAGVLRVEGKEYVMK 355

Query: 357 DGDIMHFRFNV 367
           DGD++HF FNV
Sbjct: 356 DGDVVHFLFNV 366