Pairwise Alignments

Query, 367 a.a., GTP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 365 a.a., GTP-binding protein YchF (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  411 bits (1056), Expect = e-119
 Identities = 212/367 (57%), Positives = 271/367 (73%), Gaps = 4/367 (1%)

Query: 1   MALQCGIVGLPNVGKSTLFNCLSN-AKAQAANFPFCTIEPNVGVITVPDERLNALAELVH 59
           M  + GIVGLPNVGKSTLFN L+  A AQAANFPFCTIEPNVG + VPD RL+ LAE+  
Sbjct: 1   MGFKMGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDPRLDRLAEIAG 60

Query: 60  PQRIVPTTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDDNVTHVDGSV 119
            ++++PT +  VDIAGLVKGASKGEGLGN+FLANIRE DAI HVLRCF+D +VTHV+G V
Sbjct: 61  SKQVIPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFEDGDVTHVEGRV 120

Query: 120 NPVRDKEIIDYELQLKDLETIESRIQKVQKQAQTGGDKAAKQAYDVLIQYKDALEQGKSA 179
           +P+ D   I+ EL L D+E+IE R+Q + ++ + GGDK A Q   ++     ALE+GK A
Sbjct: 121 DPIADAATIETELMLADMESIEKRLQNIVRKVR-GGDKEAVQQERLMRAAMAALEEGKPA 179

Query: 180 RTVTFETKDEQKIAHELFLLTSKPVMYVCNVDEASAVNGNKYVDMVREAVKDENAEILVV 239
           R V  + +D  K    L LLT+KP++YVCNVDEASA +GN +   V     ++ A  +V+
Sbjct: 180 RAVAVDAED-AKAWRMLQLLTTKPILYVCNVDEASAGSGNAHSKAVATMAAEQGAAHVVI 238

Query: 240 AAKTEADIAELETYEDRQMFLAEVGLEESGVARLIKSAYKLLNLETYFTAGVQEVRAWTY 299
           +A+ E +I++L+  E+ +MFL+E+GLEE+G+ RLIK+ Y LL+LETYFTAG +E RAWT 
Sbjct: 239 SAQIEEEISQLDP-EEAEMFLSEMGLEEAGLDRLIKAGYALLHLETYFTAGPKEARAWTI 297

Query: 300 EKGWKAPQCAGVIHTDFEKGFIRAEVIKYDDYIQYGSEAAVKEAGKLGVEGKEYVVQDGD 359
             G  APQ AGVIH DFE+GFIRAE I YDDY+  G E A KEAGK+  EGK YVV+DGD
Sbjct: 298 PAGTHAPQAAGVIHGDFERGFIRAETIAYDDYVALGGEQAAKEAGKMRAEGKSYVVKDGD 357

Query: 360 IMHFRFN 366
           ++HF FN
Sbjct: 358 VLHFLFN 364