Pairwise Alignments

Query, 367 a.a., GTP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 366 a.a., GTP-binding protein, probable translation factor from Caulobacter crescentus NA1000

 Score =  403 bits (1036), Expect = e-117
 Identities = 205/368 (55%), Positives = 267/368 (72%), Gaps = 3/368 (0%)

Query: 1   MALQCGIVGLPNVGKSTLFNCLSN-AKAQAANFPFCTIEPNVGVITVPDERLNALAELVH 59
           MAL+  IVGLPNVGKSTLFN L+  A AQAAN+PFCTIEPN G + VP+ RLNALA++  
Sbjct: 1   MALKVAIVGLPNVGKSTLFNALTQTASAQAANYPFCTIEPNTGDVAVPEPRLNALAKIAG 60

Query: 60  PQRIVPTTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDDNVTHVDGSV 119
            + I+P  +  VD+AGLV+GASKGEGLGN+FLANIR+ DA+  V RCF+D ++THV+G +
Sbjct: 61  SKEIIPARINFVDVAGLVRGASKGEGLGNQFLANIRDCDAVAFVARCFEDSDITHVEGRI 120

Query: 120 NPVRDKEIIDYELQLKDLETIESRIQKVQKQAQTGGDKAAKQAYDVLIQYKDALEQGKSA 179
           +P+ D EII+ EL L DLE++E R+  V+K+A++GGDK   Q   ++    + L  G+ A
Sbjct: 121 DPISDLEIIEMELMLADLESLEKRLPNVEKRAKSGGDKDMIQTLRLINLALEQLRAGRPA 180

Query: 180 RTVTFETKDEQKIAHELFLLTSKPVMYVCNVDEASAVNGNKYVDMVREAVKDENAEILVV 239
           R    + K++ K    L LLTS P +YVCNV+EASA  GNK+ D+V E    +NA+ +V+
Sbjct: 181 RAAQVD-KEDAKAWAMLQLLTSLPALYVCNVEEASADKGNKFSDLVAERAARDNAKSVVI 239

Query: 240 AAKTEADIAELETYEDRQMFLAEVGLEESGVARLIKSAYKLLNLETYFTAGVQEVRAWTY 299
           +A+ E++IA L+  E+R  FL  +GL E G+ RLI+ AY LL L+TYFT G +E RAWT 
Sbjct: 240 SAQIESEIALLDE-EERTEFLETLGLAEPGLNRLIREAYSLLGLQTYFTVGPKEARAWTI 298

Query: 300 EKGWKAPQCAGVIHTDFEKGFIRAEVIKYDDYIQYGSEAAVKEAGKLGVEGKEYVVQDGD 359
             G   PQ AGVIHTDFEKGFIRAE I +DDY++ G E   KEAGK+  EGKEYVV+DGD
Sbjct: 299 PVGATGPQAAGVIHTDFEKGFIRAETIAFDDYVKLGGENGAKEAGKMRSEGKEYVVKDGD 358

Query: 360 IMHFRFNV 367
           +MHFRFNV
Sbjct: 359 VMHFRFNV 366