Pairwise Alignments

Query, 1343 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1346 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  616 bits (1589), Expect = e-180
 Identities = 417/1361 (30%), Positives = 699/1361 (51%), Gaps = 91/1361 (6%)

Query: 34   VRFKQLSITEGLSHNTVNAISQDSKGFMWFGTRNGLCRYDGYNITRYFHEEGDSTTISHD 93
            + F   ++ +GLS N+V  I QD +GFMWFGT+ GL RYDGY   + +   G    IS +
Sbjct: 19   IYFDHFNVEKGLSQNSVLTIIQDKEGFMWFGTQYGLNRYDGYRF-KIYRNTGLKNAISAN 77

Query: 94   FITKLYNDPCRNVLWISTEQGICKYNPQNEQFTRYHIEGNNKN------SVLFLNTSDSR 147
             I  L+ND  +N LW++T  G+ KYNP+ + F +  I  ++KN             S S 
Sbjct: 78   EINYLFNDREQN-LWVATSNGLNKYNPEKDAFEKIVIN-SSKNWPGSHVITCIYEDSKSN 135

Query: 148  LLTGCSNGIYQYDNEKNSFTPFILNEG----KGENIRGLVEDSNNVLWINSNKGVK---- 199
            L  G  NG+ +        +   L  G        I+ + ED +  +W+ + KG+     
Sbjct: 136  LWIGSINGLTKMIKNPPYKSELFLKSGLNGLASNEIKAISEDDSGKIWVGTTKGLTVIDK 195

Query: 200  ---RYNLKKEQFEPLPLNIRPFLETCI----QLVMLPGNQL----LFNTPQEVFVYNINN 248
                Y  K  Q +  P ++     T I    Q  M  G Q      FN     FV N NN
Sbjct: 196  INGHYAFKTYQADGKPGSLADNYITTIVTDKQHRMWVGTQSGGFSTFNKKTNAFV-NYNN 254

Query: 249  DSLYPLAAIKDIRQFRCATTDTMNNIWLGTENGIFIYDQTFRLVTHYQQSESDLSNLNDS 308
                   A+ D    R    D   N+W+G+  G+ I + +   ++  +    +  +L+ +
Sbjct: 255  GKN---GAVND--NIRKMIFDNKGNLWIGSLEGLMIMNPSTGKISSIKHDTENRKSLSQN 309

Query: 309  PIYSLFEDYNHNMWVGTYFGGVNYFIYASDQFRIYPYGNSPNHLSGKAVRQIINTPDNG- 367
             +YSLF D  + +WVGTYFGGVN     +  F  +  G+     S   V  ++   +NG 
Sbjct: 310  SVYSLFMDKANAIWVGTYFGGVNVTYPTTTVFNNFQNGHINPAFSDNVVSSVLE--ENGG 367

Query: 368  --LYIATEDGGLNYL--NSNREITRSERLHERMNIKARNIHSLLIDSKQNLWIGLFLRGM 423
              L+I TE GGLN+   +SN+        +   ++ +  I  LL D  +NLWIG    G+
Sbjct: 368  KNLWIGTEGGGLNFYEKSSNKNTLYKNIQNNSSSLGSNLIKVLLKDKDENLWIGTHGGGL 427

Query: 424  NYYMPKENKTLSF----NDGMGKNSSGFCIIEDETGKIWYGGPSGLFT---LKKQNGSFQ 476
            NY     N    F     D +  +     + ED+ G IW G  +GL+    LK     + 
Sbjct: 428  NYLARGSNVFKRFLYSAEDQIATSREIPALAEDKKGIIWVGTQNGLYKSNELKNIFTRYN 487

Query: 477  LKKVSAL----PVFCMLNLNDSIIWTGNRQNGIYQINKRTEEQTPLPQ----FSSSKLYM 528
            +K  S +     + C+LN  +  +W G     +Y   K  +   P+ Q          Y+
Sbjct: 488  VKTASGIIEKPSIKCLLNDAEDNLWMGTTSE-LYIKPKGQDRFAPVLQRIKNIRPKIKYI 546

Query: 529  TYLYMDSQGNIWAGTNNDGLFVLNKKGEKLKSYSKKE-LGSNAIKGIIEDDQNTIWIGTD 587
              +  DS+  IW G+   GL+    +   L+ ++++  L SN I+ I+EDD + +WI T 
Sbjct: 547  NTIAQDSKKQIWIGSYYGGLYCYRSQNNTLEIFTEENGLPSNNIQAILEDDSHNLWISTS 606

Query: 588  NGLCNIQPKSGLISRYTIADGLPTNQFNYSSVCKKPDGELFFGTINGMISFYPEQVRPVE 647
            NGL    P +     Y  +DGL  N FN ++  K  +G L+FG  NG+ SFYP  ++   
Sbjct: 607  NGLSVYNPGTRHFKNYNTSDGLLNNVFNKNARLKSVNGALYFGGYNGLTSFYPNNIQSNN 666

Query: 648  PHFNIALTGVWSNNDVVSSSNPDALLPASISESDVMTLTHEQAQSIRIEYSGLNYQYKDK 707
                +  T +   N  +S+ +   LL A I+ ++ + L ++Q  ++ IE++ LN+    K
Sbjct: 667  VASPVVFTDLKLFNKSISADDESGLLKADINFTNKLVLAYDQ-NTLTIEFALLNFIKSGK 725

Query: 708  TQYAMKLEGIDKEWQFVGNQHQVRFSNLPTGDYTLKIKA-SNDGVNWDEKGQKELTIHVL 766
              +A KL+G DK W  V +     ++NLP+G YT  +K  +NDGV     G+ E+ ++  
Sbjct: 726  NHFAYKLDGYDKNWNTV-SVPAATYTNLPSGSYTFLVKGINNDGVYSANIGRIEIVVN-- 782

Query: 767  PPWWLSIWAYLTYVCMVLCIIYLAYKYTKARLILLMRLKTEHEQRVNMEKMNQSKINFFT 826
            PP++ + WAYL Y C+   I+ +  +Y      LL+R   E E+ +N     + K+ FFT
Sbjct: 783  PPFYGTWWAYLFYFCVAAAILVIIIRY------LLIRAIFEKEKEIN-----EHKLEFFT 831

Query: 827  YVSHDLKTPLTLILSPLQRLIKQKQIDNNDREKLEVIYRNANRMHYLIDELLTFSKIEMQ 886
             +SH+++TPLTLI+ PL+ LI+ ++ +      L+ I  NA+R+  L+ ELL F K E  
Sbjct: 832  NISHEIRTPLTLIVGPLEDLIETEKDNPELYRSLQPIKNNADRLMNLVTELLDFRKAESG 891

Query: 887  QMEINVRKGNIMHFLEEISHIFDIVSKEKEIDFIVSLEETDEEVWFSPSKLERIMYNLLS 946
            +M ++V  GNI+ F  EI   F  ++  K+I++    ++ + +++F   +LE++ +NLLS
Sbjct: 892  KMPLHVGSGNIVKFCREIFMAFQNMAISKQIEYNFEADKEEIQLYFDKVQLEKVFFNLLS 951

Query: 947  NAFKYTQPGDYVKLSAKLLKKDSENFIEISVKDSGRGIPKEMKDKIFDSYFQVEKKDHRE 1006
            NAFK+T      K++ K+  ++S++ + I + D+G GIP   ++ +F+ ++Q  K     
Sbjct: 952  NAFKFTPKEG--KINFKI--EESDHLVTIKICDNGPGIPLAEQENLFERFYQA-KSASTI 1006

Query: 1007 GFGLGLSLTKSLIHMHKGEIKVES-----EVGKGSEFIVSLNVSESAYSSSEKSLESITS 1061
            G GLGLS +KS++ +H G I  E+     +    + F VSL   +S +  S+   +++  
Sbjct: 1007 GTGLGLSFSKSILDLHHGNITFENIPQNADASGLTCFKVSLKTGKSHFKESDFITDAVYD 1066

Query: 1062 EEIQKYNLRMKETIE--LIPDQLISTEQDNTDVKESILIVEDNKEMNDYLAEIFSKDYQV 1119
             +  +Y   +   +E     + L+  E+ +  V    L+VEDN ++  +L +     Y +
Sbjct: 1067 HDEARYGNFLTNAVENESAGENLVLAEEQSYHV----LLVEDNDDVRSFLKKSLQTKYHI 1122

Query: 1120 FRAYNGAEACKLLKKQLPDLIVSDVMMPVMDGLELTAYVKQDLNSSHIPVILLTAKTDEL 1179
              + NG +  +   + +PD+I+SDVMMPV+DGLEL   +K D  +SHIP++LLTA++  +
Sbjct: 1123 HESENGLKGLEKAFEIIPDIIISDVMMPVLDGLELCRRLKTDERTSHIPIVLLTARSAYV 1182

Query: 1180 DHTQGYLKGADAYITKPFNAQNLELLVQNMRTNRKQNIEYFKRIEKLNITQITNNPRDEV 1239
                G   GAD+YI KPFN + L+L +QN+   R++  + F  I +L    +  N  ++ 
Sbjct: 1183 HQVNGLENGADSYIMKPFNLKILQLHIQNLLNAREKVKQKFAGIIQLEPKNLLVNTTEQN 1242

Query: 1240 FMKELVDLIMANIKDEEFGVTEIITHMKVSRSLLHTKLKSLTGCSITQFMRTIKMKEAKI 1299
            F+ +++ +I   + D +F V  + + + +S+  L+ K+++LT  S+ +F+++I++K A  
Sbjct: 1243 FLHKIIQIIETKMTDPDFDVPMLSSEIGMSQPTLYKKIRALTDLSVNEFIKSIRLKRAAQ 1302

Query: 1300 HLQNGM-NVSEASYAVGMSDPNYFTKCFKKEFNITPTEFIK 1339
             L+  + N+S+ +YAVG +D  YF+  FKK F  +PTEFI+
Sbjct: 1303 LLKQKIGNISDVAYAVGYTDRKYFSIEFKKYFGKSPTEFIQ 1343