Pairwise Alignments
Query, 1343 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5
Score = 521 bits (1341), Expect = e-151
Identities = 388/1356 (28%), Positives = 678/1356 (50%), Gaps = 111/1356 (8%)
Query: 40 SITEGLSHNTVNAISQDSKGFMWFGTRNGLCRYDGYNITRYFHEEGDSTTISHDFITKLY 99
S +GL N V +I+QD +GFMWFGT NGL R+DG + + GD+ S + +
Sbjct: 45 STEDGLVQNNVLSIAQDRQGFMWFGTENGLSRFDGLRWRSFKNILGDTNKPSSPALIRSL 104
Query: 100 NDPCRNVLWISTEQGICKYNPQNEQFTR----YHIEGNNKNSVLFLNTSDSRLLTGCSNG 155
+N LW+ T G+ ++P E+F + Y I+ K L+ +L G + G
Sbjct: 105 FWDQQNRLWMGTALGLITFDPLTEKFRQIKLPYPIQPEVKQVTRDLS---GNILAGTTAG 161
Query: 156 IYQYDNEKNSFTPF-ILNEGKGENIRGLVEDSNNVLWINSNKGVKRYNLKKEQF------ 208
I E ++G+ + S+ +W +N+G+ +K ++
Sbjct: 162 IVLITKENKIIASARAFDDGEDILCHTIFCGSDGRIWCGTNRGLFEVKIKADRIMLSRTT 221
Query: 209 EPLPLNIRPFLETCIQLV--------MLPGNQLLFNTPQEVFVYNINNDSLYPLAAIKDI 260
LP+ ++ T I++ G LL + Q F+ +L P A I
Sbjct: 222 AELPVFLQKEKITSIKMDNNGRFWFGSYAGGLLLCHYQQGKFIEAQQQPAL-PGGATHKI 280
Query: 261 RQFRCATTDTMNNIWLGTENGIFIYD----QTFRLVTHYQQSESDLSNLNDSPIYSLFED 316
R + I + T +G+F +D TF L + D +L++S I+SLF+
Sbjct: 281 RSIISLLD---HKISVATADGLFFFDINNLNTFELTS----KAGDEQSLHNSSIHSLFQQ 333
Query: 317 YNHNMWVGTYFGGVNYFIYASDQFRIYPYGNSPNHLSGKAVRQIINTPDNGLYIATEDGG 376
+ +W+G+Y+ G++ FR G + +L+ + V + N L+I TE GG
Sbjct: 334 RSGTIWIGSYYSGLDLIKPPLAPFRHLGIGPTALNLNHRVVSSVCNRNQTELWIGTEGGG 393
Query: 377 LNYLN-SNREIT--RSERLHERMNIKARNIHSLLIDSKQNLWIGLFLRGMNYYMPKENKT 433
+N N S ++++ ++++ +++ +I + I +L D NLWIG F ++ N
Sbjct: 394 INIYNQSTKQVSYLKNQQGNDK-SISSNFIKTLFKDEDGNLWIGTFSGTLDVLNASTNTI 452
Query: 434 LSFNDGMGKNSSGFCIIEDETGKIWYGGPSGLFTLKKQNGSFQLKKVSALPVFCMLNLND 493
G + + I+ED ++W +GL K+ + ++ P
Sbjct: 453 EHRLTGTERITEVNSIVEDGLNRLWITSSNGLKVYKRIRTHLKADRLMQQPGL------K 506
Query: 494 SIIWTGNRQNGIYQINKRTEEQTPLPQFSSSKLY-MTY---LYMDSQGNIWAGTNNDGLF 549
S + Q+ ++ TE + + S ++Y + Y + G I+ G + GL
Sbjct: 507 SFLAGVAFQDTKKRLWFATETKVMKVEGDSIRIYHLKYPVNTISEHHGTIYLGLESRGLA 566
Query: 550 VLNKKGEKLKSYS-KKELGSNAIKGIIEDDQNTIWIGTDNGLCNIQPKSGLISRYTIADG 608
N++ + Y ++ + ++ I D QN IW+ +D+GL + PK ++++YT ADG
Sbjct: 567 AFNEQRGQFALYQINSQVNNRSVYSIAFDRQNRIWLASDSGLLKVSPKQKIVTQYTKADG 626
Query: 609 LPTNQFNYSSVCKKPDGELFFGTINGMISFYPEQVRPVEPHFNIALTGVWSNNDVVSSSN 668
L + FN ++ ++ D LFFGT++G+I F P+Q+R +I +TG+ + V +
Sbjct: 627 LISTNFNINARYER-DNNLFFGTLDGLIYFDPDQIRDDTTKSSIVITGMRIFDVPVEIDS 685
Query: 669 PDALLPASISESDVMTLTHEQAQSIRIEYSGLNYQYKDKTQYAMKLEGIDKEWQFVGNQH 728
++L SI+ ++ + L+H Q S+ E++ L++ K + L+G+ K W N
Sbjct: 686 --SVLRKSITYTNRVELSHNQ-NSLTFEFALLDFIKPKKNAFRYSLQGLSKGWTTT-NLA 741
Query: 729 QVRFSNLPTGDYTLKIKASNDGVNWDEKGQKELTIHVLPPWWLSIWAYLTYVCMVLCIIY 788
+ F+NL G YTL + +N NW E + LTI++ PP+W + WAY+ Y ++ I++
Sbjct: 742 EATFNNLAPGTYTLMVSGNNGSPNWMEPIR--LTINIHPPFWATWWAYMLYGIILTSIVF 799
Query: 789 LAYKYTKARLILLMRLKTEHEQRVNMEKMNQSKINFFTYVSHDLKTPLTLILSPLQRLIK 848
+Y +L LK E E ++Q KINFFT VSH+++T L+LI P+++L+
Sbjct: 800 FISRY----FVLRTLLKREDE-------LHQYKINFFTNVSHEIRTHLSLISPPIEQLVS 848
Query: 849 QKQIDNNDREKLEVIYRNANRMHYLIDELLTFSKIEMQQMEINVRKGNIMHFLEEISHIF 908
+Q+ ++K+ + NA R+ L++ELL F K E + + ++ +++ LE+ +F
Sbjct: 849 DEQLGKKQKDKILGVAGNARRLLTLVNELLDFRKTEDKHLTLSENVQDLLPILEDCLQMF 908
Query: 909 DIVSKEKEIDFIVSLEETDEEVWFSPS-KLERIMYNLLSNAFKYTQPGDYVKLSAKLLKK 967
+++K+I ++ E + +L++ + NLL+NA+K+TQ G VKL
Sbjct: 909 SETAEQKQITTLLEKENLKSAFLLCDAFQLKKAIINLLANAYKFTQNGGLVKLRIS---- 964
Query: 968 DSENFIEISVKDSGRGIPKEMKDKIFDSYFQVEKKDH---REGFGLGLSLTKSLIHMHKG 1024
+ + + I+++D+GRGI + +K+F++Y+QV DH G+G+GL+L+K+++ +H+G
Sbjct: 965 QTYHEVTITIEDNGRGISQSHLNKLFENYYQVA--DHGFQNTGYGIGLALSKAIVELHQG 1022
Query: 1025 EIKVESEVGKGSEFIVSLNVSESAYSSSEKSLESITSEEIQKYNLRMKETIELIPDQ--- 1081
I V S + +E ++++ S + + + YN PD
Sbjct: 1023 TITVTSRLETMNE------PGHTSFTISLPKRQKEAYDSLAAYNAE-----HTFPDHGDE 1071
Query: 1082 ------LISTEQDNTDVKESILIVEDNKEMNDYLAEIFSKDYQVFRAYNGAEACKLLKKQ 1135
L+ Q + K +IL+ EDN E+ L +I + Y V + NG EA + K+
Sbjct: 1072 QTQHKPLLPLTQADESQKPTILLAEDNLELATLLDDILNPYYHVIISRNGKEAWEQAKRH 1131
Query: 1136 LPDLIVSDVMMPVMDGLELTAYVKQDLNSSHIPVILLTAKTDELDHTQGYLKGADAYITK 1195
+PDLI+SDVMMP M G + +K ++ ++HIP ILLTAKT D G GAD Y+TK
Sbjct: 1132 IPDLIISDVMMPEMSGFDFCDLIKSNVATNHIPFILLTAKTQTEDVITGLSHGADVYLTK 1191
Query: 1196 PFNAQ-------NLELLVQNMRTNRKQ----NIEYFKRIEKLNITQITNNPRDEVFMKEL 1244
PF Q NL + +QN+ T+ Q N E +L TQ+ + FM +L
Sbjct: 1192 PFTPQALLLQVNNLIVAIQNVHTHVGQLLNKNSEPIDIFNQLIQTQL--GTESKKFMNQL 1249
Query: 1245 VDLIMANIKDEEFGVTEIITHMKVSRSLLHTKLKSLTGCSITQFMRTIKMKEAKIHLQNG 1304
V+ I A+I++ EFGV E+ M +S +L+ K+KS+TG S+ F++ +++K+A L+
Sbjct: 1250 VENITASIENPEFGVNELARLMNMSTPILYKKVKSVTGSSVNDFIKGLRLKKAAELLETR 1309
Query: 1305 M-NVSEASYAVGMSDPNYFTKCFKKEFNITPTEFIK 1339
+ V + SY VG D YF+K FKK F P+E+I+
Sbjct: 1310 LYTVYQVSYMVGFLDSRYFSKEFKKFFGKLPSEWIE 1345
Score = 86.3 bits (212), Expect = 2e-20
Identities = 120/502 (23%), Positives = 198/502 (39%), Gaps = 72/502 (14%)
Query: 114 GICKYNPQNEQFTRYHIE-GNNKNSVLFLNTSDSRLLT-GCSNGIYQYDNEK-NSFTPFI 170
G + N Q T + E G +N+VL + + G NG+ ++D + SF +
Sbjct: 30 GALQVNAQLSVSTHFSTEDGLVQNNVLSIAQDRQGFMWFGTENGLSRFDGLRWRSFKNIL 89
Query: 171 LNEGKGEN---IRGLVEDSNNVLWINSNKGVKRYNLKKEQFEP--LPLNIRPFLETCIQL 225
+ K + IR L D N LW+ + G+ ++ E+F LP I+P ++ +
Sbjct: 90 GDTNKPSSPALIRSLFWDQQNRLWMGTALGLITFDPLTEKFRQIKLPYPIQPEVKQVTR- 148
Query: 226 VMLPGNQLLFNTPQEVFVYNINNDSLYPLAAIKDIRQFRCATT--DTMNNIWLGTENGIF 283
L GN +L T + + N + A D C T + IW GT G+F
Sbjct: 149 -DLSGN-ILAGTTAGIVLITKENKIIASARAFDDGEDILCHTIFCGSDGRIWCGTNRGLF 206
Query: 284 -IYDQTFRLVTHYQQSESDLSNLNDSPIYSLFEDYNHNMWVGTYFGGVNYFIYASDQF-R 341
+ + R++ +E + L I S+ D N W G+Y GG+ Y +F
Sbjct: 207 EVKIKADRIMLSRTTAELPVF-LQKEKITSIKMDNNGRFWFGSYAGGLLLCHYQQGKFIE 265
Query: 342 IYPYGNSPNHLSGKAVRQIINTPDNGLYIATEDGGLNYLNSNREITRSERLHERMNIKAR 401
P + K +R II+ D+ + +AT DG L + + N
Sbjct: 266 AQQQPALPGGATHK-IRSIISLLDHKISVATADG-LFFFDIN------------------ 305
Query: 402 NIHSLLIDSKQNLWIGLFLRGMNYYMPKENKTLSFNDGMGKNSSGFCIIEDETGKIWYGG 461
N+++ + SK + ++L NSS + + +G IW G
Sbjct: 306 NLNTFELTSKAG----------------DEQSLH-------NSSIHSLFQQRSGTIWIGS 342
Query: 462 P-SGLFTLKKQNGSFQLKKVSALP-------VFCMLNLNDSIIWTGNRQNGIYQINKRTE 513
SGL +K F+ + V + N N + +W G GI N+ T+
Sbjct: 343 YYSGLDLIKPPLAPFRHLGIGPTALNLNHRVVSSVCNRNQTELWIGTEGGGINIYNQSTK 402
Query: 514 EQTPLPQF-----SSSKLYMTYLYMDSQGNIWAGTNNDGLFVLNKKGEKLKSYSKKELGS 568
+ + L S S ++ L+ D GN+W GT + L VLN ++
Sbjct: 403 QVSYLKNQQGNDKSISSNFIKTLFKDEDGNLWIGTFSGTLDVLNASTNTIEHRLTGTERI 462
Query: 569 NAIKGIIEDDQNTIWIGTDNGL 590
+ I+ED N +WI + NGL
Sbjct: 463 TEVNSIVEDGLNRLWITSSNGL 484