Pairwise Alignments

Query, 1343 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1349 a.a., hybrid sensor histidine kinase/response regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  637 bits (1643), Expect = 0.0
 Identities = 410/1366 (30%), Positives = 696/1366 (50%), Gaps = 85/1366 (6%)

Query: 31   YNNVRFKQLSITEGLSHNTVNAISQDSKGFMWFGTRNGLCRYDGYNITRYFHEEGDSTTI 90
            +  + F  LS+  GLS +TV +I +DS+G+MWFGTR+ L RYDG ++  Y  +  +  +I
Sbjct: 5    FGQLSFDHLSVNNGLSQSTVLSICKDSRGYMWFGTRDCLNRYDGKSVKIYRTDPDNPASI 64

Query: 91   S-HDFITKLYNDPCRNVLWISTEQGICKYNPQNEQFTRYHIEGNNKNSV-------LFLN 142
            S  D+I  L  D  +N LWI T+ G+ +Y P+ + F R   +  N NS+       ++ +
Sbjct: 65   STEDYIYALEEDRQKN-LWIGTQNGLNRYIPEKDAFERIAFDPKNANSISDKIILSIYAD 123

Query: 143  TSDSRLLTGCSNGIYQYDN-EKNSFTPFILNEG-KGENIRGLVEDSNNVLWINSNKGVKR 200
             S  ++  G + G+   +N     F      +G  G ++  + EDS   +W+ +  G+ R
Sbjct: 124  RS-GKVWFGTNQGLSMLENGSSRKFKKIYQKDGLAGNSVYTIFEDSKGNIWVGTTTGLSR 182

Query: 201  YNLKKEQFEPLPLNIRPFLETCIQLVMLPGNQL---------------------LFNTPQ 239
             + K+ ++     +I+ F         + GN +                     LF  PQ
Sbjct: 183  LSFKEGKY-----HIQSFYHRAGDPGSISGNSIRTIAEDGKGRIWIGSESEGLNLF-LPQ 236

Query: 240  EVFVYNINNDSLYPLAAIKDIRQFRCATTDTMNNIWLGTENGIFIYDQTFRLVTHYQQSE 299
                      +L P A   DI   R    D   N+W+ T NG+ I D      T Y+   
Sbjct: 237  SHSFKRFRYSALQPNALSNDI--VRKIMPDGKGNLWIATMNGLNILDTQTLGFTSYKHDA 294

Query: 300  SDLSNLNDSPIYSLFEDYNHNMWVGTYFGGVNYFIYASDQFRIYPYGNSPNHLSGKAVRQ 359
             +  +L+D+ I  +F+D   ++W+GT FGGVN     +  F ++ Y    N +S      
Sbjct: 295  DNRKSLSDNSIKEIFQDDQGSIWIGTMFGGVNVAHRNTIPFTVFKYSKYRNSISSDISSV 354

Query: 360  IINTPDNGLYIATEDGGLNYLNSNREITRSERLHERM--NIKARNIHSLLIDSKQNLWIG 417
            I    D  L+I TE  GLN+ N    + +      R   ++    I ++  D K  +WIG
Sbjct: 355  IAADNDQNLWIGTEGQGLNFYNVKTGLFKKYINDPRDPGSLSNNTIKAIFNDRKGRIWIG 414

Query: 418  LFLRGMNYYMPKENKTLSFNDGMGKNSSGFC--IIEDETGKIWYGGPS-GLFTLKKQNGS 474
            L+  G+  ++P   K   +  G    S G+   I ED+ G++  G  S GL     +  S
Sbjct: 415  LYQGGLELFIPSTGKFKHYPPGRNGLSQGYLSSISEDDQGRLLLGTSSKGLNIFDPEKES 474

Query: 475  FQL--------KKVSALPVFCMLNLNDSIIWTGNRQN------GIYQINKRTEEQTPLPQ 520
            FQL         K+S+  +          +W G  +       G    +  + +      
Sbjct: 475  FQLIDDQPGHGLKLSSSYIRFAYQDTKKNLWVGTPRGLNFLPPGANHFSVFSRDDKTKGS 534

Query: 521  FSSSKLYMTYLYMDSQGNIWAGTNNDGLFVLNKKGEKLKSYSKKE-LGSNAIKGIIEDDQ 579
              SS++  T L+ D  G+IW GT   GL + +   +   +Y++ + L S+ I  +++D+ 
Sbjct: 535  LKSSQI--TCLWEDRLGHIWVGTMRGGLSLYHPDSKSFSTYTRAQGLASDNIIDVLDDND 592

Query: 580  NTIWIGTDNGLCNIQPKSGLISRYTIADGLPTNQFNYSSVCKKPDGELFFGTINGMISFY 639
              +WI TD GL     K G+   Y   DGLPTN+FN +S  +   G+L+FG+ +G++ F 
Sbjct: 593  GNLWISTDRGLSKFDYKRGVFKNYNTGDGLPTNEFNVNSAYRDIHGKLYFGSYDGLVVFT 652

Query: 640  PEQVRPVEPHFNIALTGVWSNNDVVSSSNPDALLPASISESDVMTLTHEQAQSIRIEYSG 699
            P ++           +G+   N  V  +  + LL   IS +  +T T EQ     +E+  
Sbjct: 653  PREITENTLIPRTVFSGLKLFNKPVGINEDNGLLKQDISFTKGITFTAEQ-NIFSLEFVS 711

Query: 700  LNYQYKDKTQYAMKLEGIDKEWQFVGNQHQVRFSNLPTGDYTLKIKASNDGVNWDEKGQK 759
            LNY    + +YA KLEG +K+W +V       ++NLP+G+Y L +K SN+   W  K   
Sbjct: 712  LNYVQPQRNRYAYKLEGFEKDWNYV-TIPSASYTNLPSGNYKLLVKGSNNDGLWS-KAPV 769

Query: 760  ELTIHVLPPWWLSIWAYLTYVCMVLCIIYLAYKYTKARLILLMRLKTEHEQRVNMEKMNQ 819
             + I VLPP W + WAY  Y      ++Y   ++T+ +  L   L  EH       ++ Q
Sbjct: 770  VMEIRVLPPLWQTWWAYTLYFIAGGLLLYFVLRFTRRQQKLKTELYYEHLNSERQSELYQ 829

Query: 820  SKINFFTYVSHDLKTPLTLILSPLQRLIKQKQIDNNDREKLEVIYRNANRMHYLIDELLT 879
             K++FFT +SH+++TPLTLI +PL++LIK    +     +L+ I RN +R+  LI ELL 
Sbjct: 830  MKLDFFTRISHEIRTPLTLIFAPLEKLIKITAENGAVNLQLQNIKRNTDRLVRLISELLD 889

Query: 880  FSKIEMQQMEINVRKGNIMHFLEEISHIFDIVSKEKEIDFIVSLEETDEEVWFSPSKLER 939
            F KIE   + + V + +++ F  +I   +  +++ K ID+    E     V++ P+++E+
Sbjct: 890  FRKIESGNLSLKVSENDLVSFCRQIYESYLGLAEIKNIDYRFECEAESMLVYYDPAQMEK 949

Query: 940  IMYNLLSNAFKYTQPGDYVKLSAKLLKKDSENFIEISVKDSGRGIPKEMKDKIFDSYFQV 999
            + YN+LSNAFK+T     +  S K     S+   +I++ D+G GIP +++DKIF ++FQV
Sbjct: 950  VFYNILSNAFKFTPDNGKITFSLK----QSDGLAKIAITDTGIGIPADLQDKIFTNFFQV 1005

Query: 1000 EK-KDHREGFGLGLSLTKSLIHMHKGEIKVESEVGKGSE-----FIVSLNVSESAYSSSE 1053
            +      EG+G+GL+L K+++ +HKGE+ V SE             VSL + ++ +S  +
Sbjct: 1006 KNGAAATEGWGIGLALAKNILDLHKGEVNVYSEPANNKRQGITILHVSLLLGKNHFSDEQ 1065

Query: 1054 KSLESITSEEIQKYNLRMKETIELIPDQLISTEQDNTDVKESILIVEDNKEMNDYLAEIF 1113
             +   I +++         E  ++   QL++ E      + ++L+VEDN E+ D++ +  
Sbjct: 1066 IASNPIVTDKPVAVGSLDHELAKI---QLVAPEDKK---RHTVLVVEDNDELRDFIVQSL 1119

Query: 1114 SKDYQVFRAYNGAEACKLLKKQLPDLIVSDVMMPVMDGLELTAYVKQDLNSSHIPVILLT 1173
               Y +    NG    ++  + +PD++VSDV MP ++G EL   +KQ+  ++HIPVI+LT
Sbjct: 1120 KHTYHILEGKNGLVGWEVATEHVPDIVVSDVTMPELNGFELCQRLKQEETTNHIPVIMLT 1179

Query: 1174 AKTDELDHTQGYLKGADAYITKPFNAQNLELLVQNMRTNRKQ-NIEYFKRIEKLNITQIT 1232
            A    +    G   GAD YITKPF+ Q LEL ++N+   R++   +Y K+I  LN  ++ 
Sbjct: 1180 AMASHVHQIDGLEAGADVYITKPFSIQVLELSIRNLLQGREELRQKYIKQI-MLNPRKLE 1238

Query: 1233 NNPRDEVFMKELVDLIMANIKDEEFGVTEIITHMKVSRSLLHTKLKSLTGCSITQFMRTI 1292
                +E F+  L+ LI   ++D EF V  ++  + +S+++L+ K+K+LTG SI+ F+++ 
Sbjct: 1239 TASPEEKFLNRLMQLIEDGMEDPEFNVGGLVDQIGMSQTVLYKKIKALTGLSISDFIKSQ 1298

Query: 1293 KMKE-AKIHLQNGMNVSEASYAVGMSDPNYFTKCFKKEFNITPTEF 1337
            ++K  A++   + MN++E +Y+VG +D  YF+K F+K+F + P+E+
Sbjct: 1299 RLKRAAQLLNDHKMNIAEVAYSVGFNDRKYFSKEFRKQFGVAPSEY 1344