Pairwise Alignments

Query, 1343 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  559 bits (1440), Expect = e-163
 Identities = 378/1366 (27%), Positives = 664/1366 (48%), Gaps = 83/1366 (6%)

Query: 15   CLLFLLHPTFAEGKIQYNNVRFKQLSITEGLSHNTVNAISQDSKGFMWFGTRNGLCRYDG 74
            C +F L         Q   +  K L +  GLS+N VN++  D  GFMW GT +GL RYDG
Sbjct: 10   CFIFFLWMGTGICFAQSTAIPLKYLGVESGLSNNVVNSLYLDHFGFMWMGTYDGLNRYDG 69

Query: 75   YNITRYFHEEGDSTTISHDFITKLYNDPCRNVLWISTEQGICKYNPQNEQFTRY-HIEGN 133
            Y+   + +  GD  ++ ++ IT L  D  +N +W+ T++GI  Y+  + +F +  +++  
Sbjct: 70   YHFKVFRNGWGDEHSLVNNHITVLNGD-AKNRVWVGTQKGISYYDYADSRFHQLIYLDKG 128

Query: 134  NKNSVLFLNTSDSRLLTGCSNGIYQYDNEKNSFTPFILNEGKGENI----------RGLV 183
             KN V +   S   +    +  +Y    EK  F     N    E I          + L 
Sbjct: 129  RKNEVSYAINS---IAISQALAVYVATEEKGLFM-LKKNSSLAERIPFGKNFDFTVKALY 184

Query: 184  EDSNNVLWIN-SNKGVKRYNLKKEQFEPLPLNIRPFLETCI-----QLVMLPGNQLLFNT 237
             D +  LW+   + G+ +Y+  K+Q +   +       TCI     Q + L   + LF  
Sbjct: 185  IDDDQTLWLFIKDVGLCKYD--KDQNKVRLVTAALSSVTCITKDTKQTLWLGTERGLFQF 242

Query: 238  PQ-----EVFVYNINNDSLYPLAAIKDIRQFRCATTDTMNNIWLGTENG-IFIYDQTFRL 291
             +       F  ++NN+++  L              D    +W+ T+ G + +YD T + 
Sbjct: 243  DKVKASISKFNQHLNNENIMGLLL------------DRQQKLWISTDGGGVAVYD-TKKQ 289

Query: 292  VTHYQQSESDLSNLNDSPIYSLFEDYNHNMWVGTYFGGVNYFIYASDQFRIYPYGN-SPN 350
             T Y  +  +   L+ + +  ++ED+    W+ T  GGVN     ++QF    +     N
Sbjct: 290  KTSYLSAGKEKGLLSSNSVAQVYEDHESRKWIATLRGGVNIIDTENEQFTTIKHDPLKSN 349

Query: 351  HLSGKAVRQIINTPDNGLYIATEDGGLNYLNSN-REITRSERLHERMNIKARNIHSLLID 409
             L    V       +  ++I T+ GGL+  N          +  +  ++ +  + S+L D
Sbjct: 350  SLINNFVLSFSEDENKNIWIGTDGGGLSVWNRKLNTFANYAKTSDPNSLTSNFVTSILND 409

Query: 410  SKQNLWIGLFLRGMNYYMPKENKTLSFNDGMGKNSSG------FCIIEDETGKIWYGGPS 463
            +  N+W+  F  G++ +     K + +N      S G      + + +D+   IW G   
Sbjct: 410  ADHNVWVASFSGGIDRFNKTTGKFVHYN--CYNTSKGVDDINIWKLYQDKQQNIWVGTTK 467

Query: 464  G--LFTLKKQNGSFQLKKVSALPVFCMLNLNDSIIWTGNRQN--GIYQINKRTEEQTPLP 519
            G  L+   K    F+L       +  +   +   +W GN      I  +NK+        
Sbjct: 468  GGALYRYNKSIDKFELFDTKLKDIHSLFQDSKGRLWAGNYTELIEIDPVNKKHN------ 521

Query: 520  QFSSSKLYMTYLYMDSQGNIWAGTNNDGLFVLNKKGEKLKSYSKKE-LGSNAIKGIIEDD 578
             ++     +  +  D    IW GT   GL + + + +K+K Y + + L SN++  I++D 
Sbjct: 522  -YTKINFAIRAIQEDFNHQIWIGTEGGGLLLFDPETKKIKRYIQSDGLPSNSVLNILQDA 580

Query: 579  QNTIWIGTDNGLCNIQPKSGLISRYTIADGLPTNQFNYSSVCKKPDGELFFGTINGMISF 638
            Q  +W  T NGL     +      Y   DGL +NQFNY++  K  +G   FG I G   F
Sbjct: 581  QGNLWCSTYNGLSRFDVRHHSFKNYYATDGLQSNQFNYNAALKLANGNFLFGGIGGFNLF 640

Query: 639  YPEQVRPVEPHFNIALTGVWSNNDVVSSSNPDALLPASISESDVMTLTHEQAQSIRIEYS 698
             P+ ++  +    + LT    NN  +      A    S+     + +    A  I I+Y+
Sbjct: 641  SPDSIKKNKRIPKMVLTDFRINN--IPLDQDSAYNDISVINLARIEIPFSDAV-ISIDYA 697

Query: 699  GLNYQYKDKTQYAMKLEGIDKEWQFVGNQHQVRFSNLPTGDYTLKIKASNDGVNWDEKGQ 758
             + + ++D+  YA  LEG D++W +V       +S L  G+Y L IK+++    W    +
Sbjct: 698  AIEFSFQDQISYAYYLEGWDRDWNYVNKLSTAYYSRLNEGEYKLHIKSTDTEGAWSNN-E 756

Query: 759  KELTIHVLPPWWLSIWAYLTYVCMVLCIIYLAYKYTKARLILLMRLKTEHEQRVNMEKMN 818
            K + I +LPPW+ + WAY  Y+ +   I YL   Y   +  L   ++  + +    + +N
Sbjct: 757  KIVVIRILPPWYRTWWAYTIYLIIGSSIFYLFQTYRNRQRRLKHEVEITNLKMEREKDLN 816

Query: 819  QSKINFFTYVSHDLKTPLTLILSPLQRLIKQKQIDNNDREKLEVIYRNANRMHYLIDELL 878
            + K+NFFT +SH+L+TPLTLI++P++ +I +K     ++  L ++YRN+ R+  L+D+LL
Sbjct: 817  EKKLNFFTNISHELRTPLTLIVNPIKDIILKKD-PGPEKNDLNIVYRNSRRLLSLVDQLL 875

Query: 879  TFSKIEMQQMEINVRKGNIMHFLEEISHIFDIVSKEKEIDFIVSLEETDEEVWFSPSKLE 938
             F K E +   + + + N+  F  EI   F+ ++K+  ID+    EE + +++    KLE
Sbjct: 876  LFRKTESENDTLKIVRINLYKFTNEIFLCFNYLAKQNHIDYTFECEEEELDIYADKDKLE 935

Query: 939  RIMYNLLSNAFKYTQPGDYVKLSAKLLKKDSENFIEISVKDSGRGIPKEMKDKIFDSYFQ 998
             + +NLLSNA K+T  G +VK S K L       ++I V DSG GIP  + +K+FD +++
Sbjct: 936  IVFFNLLSNALKFTPKGGFVKFSVKPLGMR----VQIEVSDSGPGIPAHVGEKLFDKFYK 991

Query: 999  VEKKDH-REGFGLGLSLTKSLIHMHKGEIKVESEVGKGSEFIVSLNVSESAYSSSEKSLE 1057
            V   +  + GFG+GL L K+ + +HKG+I   S  G G+ F++ + V E     S     
Sbjct: 992  VMSNESLKMGFGIGLYLAKNFVELHKGKISFRSNQGMGTIFLIDIPVGEPNLQHS----- 1046

Query: 1058 SITSEEIQKYN--LRMKETIELIPDQLISTEQDNTDVKESILIVEDNKEMNDYLAEIFSK 1115
             +   E+   N  +  +E  E    + +   Q       SIL+++DN E+ DY+  IF +
Sbjct: 1047 GVFQNELTYVNELIAQEEEAENNDTEHVGNLQLLISDLHSILVIDDNPEIIDYIRHIFQE 1106

Query: 1116 DYQVFRAYNGAEACKLLKKQLPDLIVSDVMMPVMDGLELTAYVKQDLNSSHIPVILLTAK 1175
            ++++++A NG +  K  K+ LPD+++SDV M  ++G+EL   +K D   SHIPVILLT  
Sbjct: 1107 NFKIYKAENGTDGLKRCKEYLPDIVISDVNMDGLNGIELCKAIKDDSALSHIPVILLTGD 1166

Query: 1176 TDELDHTQGYLKGADAYITKPFNAQNLELLVQNMRTNRKQNIEYFKRIEKLNITQITNNP 1235
                   +G   GA  +I+KPF+ +     + ++  NR     YF     L       + 
Sbjct: 1167 PSPEVKLKGIEVGAYDFISKPFDRELFTAKINSIIKNRTNLQSYFYNEITLKSDAHKVSQ 1226

Query: 1236 RDEVFMKELVDLIMANIKDEEFGVTEIITHMKVSRSLLHTKLKSLTGCSITQFMRTIKM- 1294
             D+ F+++ + +I  N+ ++ F V  + + + +S S L+ ++K+ +G S+  F+R I++ 
Sbjct: 1227 EDKGFLQKCIMIIEENLMEDSFNVKILASDLGMSHSNLYKRIKATSGQSVNGFIRFIRLR 1286

Query: 1295 KEAKIHLQNGMNVSEASYAVGMSDPNYFTKCFKKEFNITPTEFIKQ 1340
            K A++ +   +N++EA++ VG++D  YF + F+K F +TP+EFIK+
Sbjct: 1287 KAAELLINTNLNINEAAFRVGINDSKYFREQFQKLFKLTPSEFIKK 1332