Pairwise Alignments

Query, 1343 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1373 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  660 bits (1704), Expect = 0.0
 Identities = 418/1353 (30%), Positives = 696/1353 (51%), Gaps = 72/1353 (5%)

Query: 32   NNVRFKQLSITEGLSHNTVNAISQDSKGFMWFGTRNGLCRYDGYNITRYFHEEGDSTTIS 91
            N   FK L++  GL+ ++V +I+QD++GF+WFGTR GL +YD  +   Y+HEE +  ++S
Sbjct: 44   NKYAFKHLNVENGLTQSSVLSIAQDARGFIWFGTRFGLNKYDSKSFKVYYHEENNEKSLS 103

Query: 92   HDFITKLYNDPCRNVLWISTEQGICKYNPQNEQFTRYHIEGNNKNSV------LFLNTSD 145
            +              L I T  G+ KYN  ++ F  Y     + NS+             
Sbjct: 104  NASFLSSILALKDGTLLIGTSNGLNKYNEGDDNFDHYVHNSKDPNSISNAGISCIFQDKK 163

Query: 146  SRLLTGCSNGIYQYD-NEKNSFTPFILNEGKGENIRGLVEDSNNVLWINSNKGVKRYNLK 204
            +R+  G +NG+     N K  F  F+  + + + I  + ED N  LW+++  G+     K
Sbjct: 164  NRVWIGTTNGLNLLSTNGKYKFKRFLDKQKQRQQIYAITEDHNGTLWLSTTYGLVNMRFK 223

Query: 205  KEQ-----FEPLPLNIRPFLETCIQ-LVMLPGNQLLFNTPQE-VFVYNINNDSL--YPLA 255
              +     F+     +   ++  I  +V    N L   T Q  V   N++ +++  Y  +
Sbjct: 224  DGKIHLRYFKDFSEELNKAIDNHITTMVEDRENNLWIGTKQTGVSKLNLSTETITSYQYS 283

Query: 256  AIKDI----RQFRCATTDTMNNIWLGTENGIFIYDQTFRLVTHYQQSESDLSNLNDSPIY 311
            ++          R    D    +W+GT +GI IY+   +  +       D ++L+ + +Y
Sbjct: 284  SLNPAGISSNNVRKIMMDQEGKLWIGTLHGINIYNPATKNFSSLHNIPEDPTSLSQNSVY 343

Query: 312  SLFEDYNHNMWVGTYFGGVNYFIYASDQFRIYPYGNSPNHLSGKAVRQIINTPDNGLYIA 371
             +++D    +WVGTY+G +N        F++Y    +PN LS   V  I+      L+I 
Sbjct: 344  DIYQDRQGIIWVGTYYGAINMVYPNYTPFKVYRSTTAPNGLSSNVVSSIMEDQHQNLWIG 403

Query: 372  TEDGGLNYLN-SNREITR-SERLHERMNIKARNIHSLLIDSKQNLWIGLFLRGMNYYMPK 429
            TE  GLNY +  N   TR     ++  ++ A  + S++ D K  +W+G    G+N + P+
Sbjct: 404  TEGEGLNYYDRKNDTFTRYKNNPNDPKSLSANLVKSVIRDKKNRIWVGTHYGGLNLFQPE 463

Query: 430  ENKTLSF----NDGMG-KNSSGFCIIEDETGKIWYGGPSGLFTLKKQNGSFQLKKVSALP 484
                + +    ND     N     + ED  G+ W G   GL +     G F   +V+ L 
Sbjct: 464  TKTFVRYTKHKNDTSSISNDEITALFEDSYGRFWVGTNGGLNSFNSTTGKFIRNRVNGLT 523

Query: 485  VFCMLNLNDS--IIWTGNRQNGIYQINKRTEEQTPLPQFSSSKLYMTY-----LYMDSQG 537
                    D+   +W     +G+YQ+ K  + Q  + + ++    + Y     L  D  G
Sbjct: 524  DAVHYIFEDAKRCLWVATN-SGLYQLKK--DSQRFISRVAADPEILKYNEITCLTTDKAG 580

Query: 538  NIWAGTNNDGLFVLNKKGEKLKSYSKKE----LGSNAIKGIIEDDQNTIWIGTDNGLCNI 593
             +  GT+++GLF LN       SYS+      L SN I GI+EDD N +WI TD GLC  
Sbjct: 581  YLLMGTSHNGLFRLNPGRH---SYSRMTTFDGLPSNNIMGILEDDFNNLWITTDKGLCKY 637

Query: 594  QPKSGLISRYTIADGLPTNQFNYSSVCKKPDGELFFGTINGMISFYPEQVRPVEPHFNIA 653
             P+      Y I DGLP N+FNY S  +   G  FFG ++GM+SF+P +++  +    + 
Sbjct: 638  NPRQKTFKTYNIKDGLPGNEFNYKSFLRDSKGAFFFGGLSGMVSFFPNEIKENKNTPPVI 697

Query: 654  LTGVWSNNDVVSSSNPDALLPASISESDVMTLTHEQAQSI-RIEYSGLNYQYKDKTQYAM 712
             TG+   N  ++    D LL  +IS   + ++T E  Q++  I+++ LN+   DK +YA 
Sbjct: 698  FTGLKLFNKPIALHTGDGLLKQNIST--IKSITFESDQNVFSIDFTLLNFIKSDKNRYAY 755

Query: 713  KLEGIDKEWQFVGNQHQVRFSNLPTGDYTLKIKASNDGVNWDEKGQKELTIHVLPPWWLS 772
            KL G +K W +V +     ++NL  G+YTL +K SN+   W  +    L I +LPP++ +
Sbjct: 756  KLGGFEKNWNYV-DIPSASYTNLSPGNYTLMVKGSNNDGLWTNE-TSTLDIKILPPFYRT 813

Query: 773  IWAYLTYVCMVLCIIYLAYKYTKARLILLMRLKTEHEQRVNMEKMNQSKINFFTYVSHDL 832
             WAYL Y C    I ++  +Y    L++   LK E E       +N+ K+ FFT +SH++
Sbjct: 814  WWAYLFYFCAFAAISFVFIRY----LLIKAVLKKEKE-------INEHKLEFFTNISHEI 862

Query: 833  KTPLTLILSPLQRLIKQKQIDNNDREKLEVIYRNANRMHYLIDELLTFSKIEMQQMEINV 892
            +TPLTLI+ PL +LI+  + D      L+ I  NA+R+  L+ ELL F K E  +M ++V
Sbjct: 863  RTPLTLIVGPLDKLIENAKDDPALNRDLQPIKNNADRLMNLVTELLDFRKAESGKMALHV 922

Query: 893  RKGNIMHFLEEISHIFDIVSKEKEIDFIVSLEETDEEVWFSPSKLERIMYNLLSNAFKYT 952
              G+++ F  EI   F  ++  K ID+     +   E++F   ++E++M+NLLSNAFK+T
Sbjct: 923  SPGDVVKFCREIFLAFQNMAISKNIDYQFETTQAAIELYFDKVQMEKVMFNLLSNAFKFT 982

Query: 953  QPGDYVKLSAKLLKKDSENFIEISVKDSGRGIPKEMKDKIFDSYFQVEKKDHREGFGLGL 1012
                 + L  +  K+     + I + D+G+GIP E +  +F +++Q        G GLGL
Sbjct: 983  PVNGKISLKIETEKQ----LVNIKICDNGKGIPLENQASLFTNFYQANATT-TIGTGLGL 1037

Query: 1013 SLTKSLIHMHKGEIKVES-----EVGKGSEFIVSLNVSESAYSSSEKSLESITSEEIQKY 1067
            S +KS++ +H G+I  ES     +    + F VSL   +  ++ S+   + +  ++   Y
Sbjct: 1038 SFSKSIVELHHGQISFESTPKNDKAFGNTAFTVSLKTGKEHFNPSDFIPDYVYYDDALNY 1097

Query: 1068 NLRMKETI-ELIPDQLISTEQDNTDVKESILIVEDNKEMNDYLAEIFSKDYQVFRAYNGA 1126
            +L     + E I +  +  +    + K SIL+VEDN+++  ++ +  S  YQ++   NGA
Sbjct: 1098 SLSTTTQVTEQIKEDDVLQDDSGKNKKNSILLVEDNEDVRTFIKQALSPSYQIYERENGA 1157

Query: 1127 EACKLLKKQLPDLIVSDVMMPVMDGLELTAYVKQDLNSSHIPVILLTAKTDELDHTQGYL 1186
               +     +PDLI+SDVMMPVMDGLEL   +K D  +SHIPV+LLTA++  +    G+ 
Sbjct: 1158 TGLECALDLIPDLIISDVMMPVMDGLELCRKLKTDERTSHIPVVLLTARSAYVHQVNGFE 1217

Query: 1187 KGADAYITKPFNAQNLELLVQNMRTNRKQNIEYFKRIEKLNITQITNNPRDEVFMKELVD 1246
             GADAYI KPFN + LEL +QN+   R+   + F ++  L    +  N  ++ F+ +++ 
Sbjct: 1218 NGADAYIMKPFNLKILELNIQNLLNARETVKKKFAQVITLEPRNMVINTTEQHFLNKIIQ 1277

Query: 1247 LIMANIKDEEFGVTEIITHMKVSRSLLHTKLKSLTGCSITQFMRTIKMKEAKIHLQNGM- 1305
            LI   I D +F V  +   + +S+ +L+ K+++LT  S+  F++++++K A   L+ G  
Sbjct: 1278 LIEDRIADPDFDVPTLSAEVGMSQPVLYKKIRALTDLSVNDFIKSLRIKRAAQLLKQGTG 1337

Query: 1306 NVSEASYAVGMSDPNYFTKCFKKEFNITPTEFI 1338
            N++E +Y+VG +D  YF+  FKK F  TP+EF+
Sbjct: 1338 NIAEIAYSVGFNDRKYFSSEFKKHFGKTPSEFM 1370