Pairwise Alignments

Query, 1376 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1346 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  668 bits (1724), Expect = 0.0
 Identities = 446/1412 (31%), Positives = 730/1412 (51%), Gaps = 119/1412 (8%)

Query: 3    TYIAAFFLLLSATFVAAHPYL-IQRLGIEQGLSNNYVLSITQDKQGFLWFATEEGLNKFD 61
            T+IA   +LLS   ++A   +      +E+GLS N VL+I QDK+GF+WF T+ GLN++D
Sbjct: 2    TFIA---VLLSPLRISAQQQIYFDHFNVEKGLSQNSVLTIIQDKEGFMWFGTQYGLNRYD 58

Query: 62   GTRFITYYKEEQSSSVQSITGNELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQY 121
            G RF  Y     +    +I+ NE+N ++ D  Q  +W+AT   GLN YN E  +F     
Sbjct: 59   GYRFKIY---RNTGLKNAISANEINYLFNDREQN-LWVATSN-GLNKYNPEKDAFEKIVI 113

Query: 122  NPED--PQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIATGKFTHYNKSTVPALPS 179
            N     P S +   +   + S      LW+ +     + +     K   + KS +  L S
Sbjct: 114  NSSKNWPGSHVITCIYEDSKS-----NLWIGSINGLTKMIKNPPYKSELFLKSGLNGLAS 168

Query: 180  EQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNG 239
             +    +E + GK+++G  +G   I  +N             P SL  N +  I  D   
Sbjct: 169  NEIKAISEDDSGKIWVGTTKGLTVIDKINGHYAFKTYQADGKPGSLADNYITTIVTDKQH 228

Query: 240  NIWIGT-SKGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK--LWIATELNG 296
             +W+GT S G + FN  T  F N++N     +GA++  I   K + DNK  LWI + L G
Sbjct: 229  RMWVGTQSGGFSTFNKKTNAFVNYNNGK---NGAVNDNIR--KMIFDNKGNLWIGS-LEG 282

Query: 297  IMILDLQQNQFLLPEQIRFEFIR-EGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFI 355
            +MI++        P   +   I+ + +N  SLS  S   +F D  N IW+GT+ GG+N  
Sbjct: 283  LMIMN--------PSTGKISSIKHDTENRKSLSQNSVYSLFMDKANAIWVGTYFGGVNVT 334

Query: 356  SNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFE--NGKRVA 412
                  F+ +          + S+ VVSSV ++  GK LWIGT+GGG+N +E  + K   
Sbjct: 335  YPTTTVFNNFQNGHIN---PAFSDNVVSSVLEENGGKNLWIGTEGGGLNFYEKSSNKNTL 391

Query: 413  IYNKENRE--LLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELL--- 467
              N +N    L SN +   LKD + NLW GT+ G ++Y       F+       + +   
Sbjct: 392  YKNIQNNSSSLGSNLIKVLLKDKDENLWIGTHGGGLNYLARGSNVFKRFLYSAEDQIATS 451

Query: 468  -DVRVFYEDKNKKIWIGTHAGVFVIDLASKKVIHHYD--TSNSQLLENFVRSIAQDSEGR 524
             ++    EDK   IW+GT  G++  +   K +   Y+  T++  + +  ++ +  D+E  
Sbjct: 452  REIPALAEDKKGIIWVGTQNGLYKSN-ELKNIFTRYNVKTASGIIEKPSIKCLLNDAEDN 510

Query: 525  FWIGTFGG------GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGEG-L 577
             W+GT         G   + P +Q ++       +    IN I + SK Q+W+ +  G L
Sbjct: 511  LWMGTTSELYIKPKGQDRFAPVLQRIKNIRPKIKY----INTIAQDSKKQIWIGSYYGGL 566

Query: 578  VCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCFYTYDHS 637
             C+ S  N   ++F  + GLP+ +I+AI ED + N+W ST+ G+S Y    + F  Y+ S
Sbjct: 567  YCYRSQNN-TLEIFTEENGLPSNNIQAILEDDSHNLWISTSNGLSVYNPGTRHFKNYNTS 625

Query: 638  NNIPQGSFISGCVTKDHNGLIYFGSINGLCFFNPDIAINSPQIPPVVITKVRIPGRLTSR 697
            + +    F      K  NG +YFG  NGL  F P+   ++    PVV T +++  +  S 
Sbjct: 626  DGLLNNVFNKNARLKSVNGALYFGGYNGLTSFYPNNIQSNNVASPVVFTDLKLFNKSISA 685

Query: 698  EKNETAIPIS---EGEIELTHEQNSFNLTFNVQDYSLANQVEYAYMLKGLENSWYTINEQ 754
            +     +        ++ L ++QN+  + F + ++  + +  +AY L G + +W T++  
Sbjct: 686  DDESGLLKADINFTNKLVLAYDQNTLTIEFALLNFIKSGKNHFAYKLDGYDKNWNTVSVP 745

Query: 755  NSVTFRNIPPGKYEFLVKARLHNQDWSEDTTSLRIHINPPLWLTWWAKLIYILITISIIY 814
             + T+ N+P G Y FLVK   ++  +S +   + I +NPP + TWWA L Y  +  +I+ 
Sbjct: 746  -AATYTNLPSGSYTFLVKGINNDGVYSANIGRIEIVVNPPFYGTWWAYLFYFCVAAAILV 804

Query: 815  TIIHAYKKKIDLESLYTLEKKNHEQEQELNQERLRFYTNITHELRTPLTLILGPLEDMQK 874
             II            Y L +   E+E+E+N+ +L F+TNI+HE+RTPLTLI+GPLED+ +
Sbjct: 805  IIIR-----------YLLIRAIFEKEKEINEHKLEFFTNISHEIRTPLTLIVGPLEDLIE 853

Query: 875  DTSLPTRQAQKLSVIHLSALRLLNLINQILEFRKTETQNKKLCVCKGNIVPLIHEIGLKY 934
                     + L  I  +A RL+NL+ ++L+FRK E+    L V  GNIV    EI + +
Sbjct: 854  TEKDNPELYRSLQPIKNNADRLMNLVTELLDFRKAESGKMPLHVGSGNIVKFCREIFMAF 913

Query: 935  KELNQKKAIDFQIQIEKEEMPLFFDKEIITIILDNLISNAIKYT-EQGKITLSLYPTTRN 993
            + +   K I++  + +KEE+ L+FDK  +  +  NL+SNA K+T ++GKI   +  +   
Sbjct: 914  QNMAISKQIEYNFEADKEEIQLYFDKVQLEKVFFNLLSNAFKFTPKEGKINFKIEESDH- 972

Query: 994  GVTYTEIKVSDTGYGISAEALPHVFDRYYQESGKHQASGTGIGLALVRNLVELHEGEIRV 1053
                  IK+ D G GI      ++F+R+YQ        GTG+GL+  +++++LH G I  
Sbjct: 973  ---LVTIKICDNGPGIPLAEQENLFERFYQAKSA-STIGTGLGLSFSKSILDLHHGNITF 1028

Query: 1054 ESI-QNEGST----FYISL------------LTDNIYPNALHGDSTKQTEEEMISEAVPE 1096
            E+I QN  ++    F +SL            +TD +Y      D  +      ++ AV  
Sbjct: 1029 ENIPQNADASGLTCFKVSLKTGKSHFKESDFITDAVY------DHDEARYGNFLTNAVEN 1082

Query: 1097 DSQNTE---PETSKPILLIVEDNEDIQKYIAESFSDSFEVITGSNGEEGKQQALNRIPDI 1153
            +S        E     +L+VEDN+D++ ++ +S    + +    NG +G ++A   IPDI
Sbjct: 1083 ESAGENLVLAEEQSYHVLLVEDNDDVRSFLKKSLQTKYHIHESENGLKGLEKAFEIIPDI 1142

Query: 1154 IVSDIMMPVMDGITLCRQLKEDVRTSHIPVILLTAKDSLQDKEEGYEVGADSYLTKPFSA 1213
            I+SD+MMPV+DG+ LCR+LK D RTSHIP++LLTA+ +   +  G E GADSY+ KPF+ 
Sbjct: 1143 IISDVMMPVLDGLELCRRLKTDERTSHIPIVLLTARSAYVHQVNGLENGADSYIMKPFNL 1202

Query: 1214 SLLRSRINNLLDSRKKLIAQFQQTGTNHNPNSHLDEKRSIITEALSKLDNEFIEKITQLV 1273
             +L+  I NLL++R+K+  +F            L+ K  ++    +  +  F+ KI Q++
Sbjct: 1203 KILQLHIQNLLNAREKVKQKFAGI-------IQLEPKNLLV----NTTEQNFLHKIIQII 1251

Query: 1274 EDNLSSEKIDITYLSDKMCMSGSTLYRKMKALTGLSTNEYIRKVKMQNAERLLLEGKYNI 1333
            E  ++    D+  LS ++ MS  TLY+K++ALT LS NE+I+ ++++ A +LL +   NI
Sbjct: 1252 ETKMTDPDFDVPMLSSEIGMSQPTLYKKIRALTDLSVNEFIKSIRLKRAAQLLKQKIGNI 1311

Query: 1334 SEIAYKIGMNSTGYFRQCFKDEFGVSPSDYLK 1365
            S++AY +G     YF   FK  FG SP+++++
Sbjct: 1312 SDVAYAVGYTDRKYFSIEFKKYFGKSPTEFIQ 1343