Pairwise Alignments

Query, 1376 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1365 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  630 bits (1624), Expect = 0.0
 Identities = 429/1405 (30%), Positives = 707/1405 (50%), Gaps = 106/1405 (7%)

Query: 8    FFLLLSATFVAAHPYLI-QRLGIEQGLSNNYVLSITQDKQGFLWFATEEGLNKFDGTRFI 66
            F +L   T + A  +L+   L +E GLS N V++ITQDK  F+W  T  GLN++DG RF 
Sbjct: 11   FPMLFICTTLCAQKHLVFNHLRMENGLSQNSVMAITQDKNQFIWMGTRHGLNRYDGYRFK 70

Query: 67   TYYKEEQSSSVQSITGNELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDP 126
             Y     S ++ S++ N +N + +D  +  +W+ T+  GLN YN +   F  Y+ N    
Sbjct: 71   IY--NNSSDNLNSLSDNVINTLLSDS-KGRLWVGTEN-GLNIYNDKNDHF--YRINKRSS 124

Query: 127  QSLITND-VTHITSSVQAGKGLWVCTYYRGIEYLDIATGKFTHY------NKSTVPALPS 179
             +  + D V  I    Q  K +WV TY      +D     F  +       KS +  +  
Sbjct: 125  ANSFSCDSVECIYEDPQ--KNIWVGTYNGLNLVIDTEKQIFKKFLFDKPNYKSALNCI-- 180

Query: 180  EQTWTATEAEDGKLYIGHVEGGLSILSLNDK-SVKHFVHDPQNPNSLPGNDVRCIYKDTN 238
               ++  + E   L++G   G + I  +  K   + F H+P N NS+  N V+ I  D  
Sbjct: 181  ---FSIFKDEKQNLWVGTYNGLVRIYQVKGKYHFEIFRHNPNNKNSISSNAVKSIVIDKQ 237

Query: 239  GNIWIGTSKGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIM 298
              +W+GT  GL LF+   +TF  +  +  + +  +++ I  + + K   +WI T+  G+ 
Sbjct: 238  KRLWLGTYNGLNLFDYEHKTFKRYQTSATDPNSIINNDIRKLTRDKVGNIWIGTQ-EGLS 296

Query: 299  ILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNA 358
            ILD    +F         +  + +    LS  S   IFQD   ++++GT+  G N +  +
Sbjct: 297  ILDPNTRKFS-------NYRYDPEQPDGLSQNSIHSIFQDLNGSVYLGTYYKGANVVYPS 349

Query: 359  PPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNK-- 416
               F  +  S T+     LS+ +VS++ +D    LWIGT+GGG+N          Y K  
Sbjct: 350  ATPFTVFRNSKTRQG---LSSDIVSAMVEDQNHNLWIGTEGGGLNYVNRSNHTFTYYKLE 406

Query: 417  --ENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNEL-----LDV 469
               N  L SN +     D  G L  GT+ G +  +N     F+ I   KN+       +V
Sbjct: 407  PNSNNGLNSNLIKTLCLDKTGQLLVGTHRGGLYLFNAAGHNFKKIINVKNKKNNPGGSEV 466

Query: 470  RVFYEDKNKKIWIGTHAGVFVIDLASKKVIHHYDTSNSQLLEN----FVRSIAQDSEGRF 525
                ED +  +W+G+  G+    L     ++   T  S L +N    +++ I +D     
Sbjct: 467  IAITEDSDGTVWVGSRDGLST--LKKTNGLYAATTVKSPLEQNLRNKYIQVIFEDKAKNL 524

Query: 526  WIGTFGGGVGIYTPDMQLVRKFNQYE----GFCSNTINQIYRSSKGQMWLATGEGLVCFP 581
            WIGT  G +  Y P  + +  + + +       S+ IN I +   G + + T  G +   
Sbjct: 525  WIGTMAG-LYAYHPATKRITAYYKNKTKPGSLNSDHINCIVQIQNGNICVGTSFGGLSIF 583

Query: 582  SARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCFYTYDHSNNIP 641
              ++  ++ +  K+GLPN+++  I ED+  N+W ST+ G+S  IT    F  Y  S+ + 
Sbjct: 584  DNKSRKFKNYNEKDGLPNSNVLGIIEDEENNLWISTDKGLSKLITKTGRFINYTKSDGLA 643

Query: 642  QGSFISGCVTKDHNGLIYFGSINGLCFFNPD-IAINSPQ-IPPVVITKVRI---PGRLTS 696
               F      KD  G ++FG  +GL  F P  I INS + + P+  T++++   P  + +
Sbjct: 644  GNDFNIRSFLKDSRGELFFGGYDGLTAFYPSQIDINSNRNVAPITFTELKLFDKPVAVNA 703

Query: 697  REKNETAIPISEGEIELTHEQNSFNLTFNVQDYSLANQVEYAYMLKGLENSWYTINEQNS 756
             +        S  +I   H+ N+F+L F + +Y    +  Y Y+LKG    W    +  S
Sbjct: 704  PDGLLNEDIKSIKQITFKHDNNNFSLDFALLNYIKPEKNSYRYILKGHSKDWVK-TDVPS 762

Query: 757  VTFRNIPPGKYEFLVKARLHNQDWSEDTTSLRIHINPPLWLTWWAKLIYILITISIIYTI 816
            VT+ ++P G Y F+V    ++ +      SL+I + PP W TWWA LIY+     +++ I
Sbjct: 763  VTYSDLPAGNYTFIVTGNNNDGNPGNKPASLKITVLPPFWATWWAYLIYLACFSGLLFLI 822

Query: 817  IHAYKKKIDLESLYTLEKKNHEQEQELNQERLRFYTNITHELRTPLTLILGPLEDMQKDT 876
            +            Y   +   ++ +++ + +L F+T + HE+RTPLTLILGPLE++ K  
Sbjct: 823  VR-----------YLFVRALLKRTEDIQKMKLNFFTYVAHEIRTPLTLILGPLENLSKQY 871

Query: 877  SLPTRQAQKLSVIHLSALRLLNLINQILEFRKTETQNKKLCVCKGNIVPLIHEIGLKYKE 936
               T   +++  I  +A RL+ LI ++++FRK ET +  L V + NIV  I+EI + +  
Sbjct: 872  QTDTELNRQIIPIKNNANRLMRLITELMDFRKAETGHLTLHVTEDNIVDFINEIFISFSH 931

Query: 937  LNQKKAIDFQIQIEKEEMPLFFDKEIITIILDNLISNAIKYTEQG-KITLSLYPTTRNGV 995
            L Q   I ++    +E + LFFDK  +  +L NL+SNA K+ ++G KI+++L        
Sbjct: 932  LAQTNDIQYEFVRGQENISLFFDKRQLEKVLFNLLSNAFKFCDKGGKISVTLVDMDNE-- 989

Query: 996  TYTEIKVSDTGYGISAEALPHVFDRYYQESGKHQAS-GTGIGLALVRNLVELHEGEIRVE 1054
                I ++D G GI AE+L ++F  Y+Q   +H    G+GIGLAL + +VE H+G I VE
Sbjct: 990  --VAISIADNGLGIPAESLKNLFSDYFQVDEQHSNQIGSGIGLALSKAIVEEHKGHIAVE 1047

Query: 1055 SIQNE---------------GSTFYISLLTDNIYPNALHGDSTKQTEEEMISEAVPEDSQ 1099
            S   E               G + + + + D       H +   Q  E+ ++   PE   
Sbjct: 1048 STPAENGERGFTNFTVRLKKGKSHFKTAIFDGAKDYPTHPNIYTQQPEKELNILKPEKET 1107

Query: 1100 NTEPETSKPILLIVEDNEDIQKYIAESFSDSFEVITGSNGEEGKQQALNRIPDIIVSDIM 1159
            +   ET    +L+VEDN +I++ IA      + V    NG  G + A+  +PD+I+ DIM
Sbjct: 1108 DLSTET----ILVVEDNSEIRQLIASLIGGHYLVAESENGLMGWETAVETLPDLIICDIM 1163

Query: 1160 MPVMDGITLCRQLKEDVRTSHIPVILLTAKDSLQDKEEGYEVGADSYLTKPFSASLLRSR 1219
            MP+MDGI LCR+LKED RTSHIPVI+LTA+ S   +  G E GAD+Y+TKPFS  LL   
Sbjct: 1164 MPIMDGIELCRRLKEDERTSHIPVIILTARSSHIHQVSGLETGADAYITKPFSPELLLLN 1223

Query: 1220 INNLLDSRKKLIAQFQQTGTNHNPNSHLDEKRSIITEALSKLDNEFIEKITQLVEDNLSS 1279
            + NLL SR+ +  +F +       + HL  K   I    + +D  F+ K+ + ++++++ 
Sbjct: 1224 VRNLLMSRQVMRQKFLK-------HIHLQPKELTI----NAIDEAFMLKLLKYIDEHITD 1272

Query: 1280 EKIDITYLSDKMCMSGSTLYRKMKALTGLSTNEYIRKVKMQNAERLLLEGKYNISEIAYK 1339
            E   ++ L+  + MS   LY+K++ LT LS N++++ ++++ A  L  + ++ I E+AY+
Sbjct: 1273 EDFGVSELASMVGMSRPVLYKKIRNLTNLSVNDFVKSIRLKKAMELFKQNRFTIYEVAYQ 1332

Query: 1340 IGMNSTGYFRQCFKDEFGVSPSDYL 1364
            +G N   YF + FK +FG SP  ++
Sbjct: 1333 VGFNDPKYFSREFKKQFGKSPRAFM 1357