Pairwise Alignments

Query, 1376 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1349 a.a., hybrid sensor histidine kinase/response regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  586 bits (1511), Expect = e-171
 Identities = 402/1426 (28%), Positives = 691/1426 (48%), Gaps = 183/1426 (12%)

Query: 27   LGIEQGLSNNYVLSITQDKQGFLWFATEEGLNKFDGTRFITYYKEEQSSSVQSITGNELN 86
            L +  GLS + VLSI +D +G++WF T + LN+                           
Sbjct: 13   LSVNNGLSQSTVLSICKDSRGYMWFGTRDCLNR--------------------------- 45

Query: 87   EVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKG 146
                                    Y+ +S  +Y+ +P++P S+ T D  +     +  K 
Sbjct: 46   ------------------------YDGKSVKIYRTDPDNPASISTEDYIYALEEDRQ-KN 80

Query: 147  LWVCTYYRGIEYLDIATG-KFTHYNKSTVPALPSEQTWTATEAEDGKLYIGHVEGGLSIL 205
            LW+ T      Y+      +   ++     ++  +   +      GK++ G  +G    L
Sbjct: 81   LWIGTQNGLNRYIPEKDAFERIAFDPKNANSISDKIILSIYADRSGKVWFGTNQG----L 136

Query: 206  SLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTSKGLALFNA-----NTETFT 260
            S+ +             + L GN V  I++D+ GNIW+GT+ GL+  +      + ++F 
Sbjct: 137  SMLENGSSRKFKKIYQKDGLAGNSVYTIFEDSKGNIWVGTTTGLSRLSFKEGKYHIQSFY 196

Query: 261  NFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIRE 320
            +   +PG+I G   + I +I +    ++WI +E  G+ +   Q + F   ++ R+  ++ 
Sbjct: 197  HRAGDPGSISG---NSIRTIAEDGKGRIWIGSESEGLNLFLPQSHSF---KRFRYSALQP 250

Query: 321  GDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNK 380
                 +LSN   R I  D   N+WI T  G +N +     T    SY     N  SLS+ 
Sbjct: 251  N----ALSNDIVRKIMPDGKGNLWIATMNG-LNILDTQ--TLGFTSYKHDADNRKSLSDN 303

Query: 381  VVSSVCDDGQGKLWIGTDGGGINVFENGK---RVAIYNKENRELLSNSVLCSLKDSEGNL 437
             +  +  D QG +WIGT  GG+NV         V  Y+K    + S+       D++ NL
Sbjct: 304  SIKEIFQDDQGSIWIGTMFGGVNVAHRNTIPFTVFKYSKYRNSISSDISSVIAADNDQNL 363

Query: 438  WFGTYLGNISYYNTR---LKKFQIIELEKNELLD--VRVFYEDKNKKIWIGTHAGVFVID 492
            W GT    +++YN +    KK+     +   L +  ++  + D+  +IWIG + G   + 
Sbjct: 364  WIGTEGQGLNFYNVKTGLFKKYINDPRDPGSLSNNTIKAIFNDRKGRIWIGLYQGGLELF 423

Query: 493  LASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEG 552
            + S     HY    + L + ++ SI++D +GR  +GT   G+ I+ P+ +  +  +   G
Sbjct: 424  IPSTGKFKHYPPGRNGLSQGYLSSISEDDQGRLLLGTSSKGLNIFDPEKESFQLIDDQPG 483

Query: 553  ----FCSNTINQIYRSSKGQMWLATGEGLVCFPSARNF---------------------- 586
                  S+ I   Y+ +K  +W+ T  GL   P   N                       
Sbjct: 484  HGLKLSSSYIRFAYQDTKKNLWVGTPRGLNFLPPGANHFSVFSRDDKTKGSLKSSQITCL 543

Query: 587  -------------------------DYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTGI 621
                                      +  + R +GL + +I  + +D +GN+W ST+ G+
Sbjct: 544  WEDRLGHIWVGTMRGGLSLYHPDSKSFSTYTRAQGLASDNIIDVLDDNDGNLWISTDRGL 603

Query: 622  SCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSINGLCFFNPDIAINSPQIP 681
            S +   +  F  Y+  + +P   F      +D +G +YFGS +GL  F P     +  IP
Sbjct: 604  SKFDYKRGVFKNYNTGDGLPTNEFNVNSAYRDIHGKLYFGSYDGLVVFTPREITENTLIP 663

Query: 682  PVVITKVRIPGRLTSREKN----ETAIPISEGEIELTHEQNSFNLTFNVQDYSLANQVEY 737
              V + +++  +     ++    +  I  ++G I  T EQN F+L F   +Y    +  Y
Sbjct: 664  RTVFSGLKLFNKPVGINEDNGLLKQDISFTKG-ITFTAEQNIFSLEFVSLNYVQPQRNRY 722

Query: 738  AYMLKGLENSWYTINEQNSVTFRNIPPGKYEFLVKARLHNQDWSEDTTSLRIHINPPLWL 797
            AY L+G E  W  +    S ++ N+P G Y+ LVK   ++  WS+    + I + PPLW 
Sbjct: 723  AYKLEGFEKDWNYVTIP-SASYTNLPSGNYKLLVKGSNNDGLWSKAPVVMEIRVLPPLWQ 781

Query: 798  TWWAKLIYILITISIIYTIIHAYKKKIDLESLYTLEKKNHEQEQELNQERLRFYTNITHE 857
            TWWA  +Y +    ++Y ++   +++  L++    E  N E++ EL Q +L F+T I+HE
Sbjct: 782  TWWAYTLYFIAGGLLLYFVLRFTRRQQKLKTELYYEHLNSERQSELYQMKLDFFTRISHE 841

Query: 858  LRTPLTLILGPLEDMQKDTSLPTRQAQKLSVIHLSALRLLNLINQILEFRKTETQNKKLC 917
            +RTPLTLI  PLE + K T+       +L  I  +  RL+ LI+++L+FRK E+ N  L 
Sbjct: 842  IRTPLTLIFAPLEKLIKITAENGAVNLQLQNIKRNTDRLVRLISELLDFRKIESGNLSLK 901

Query: 918  VCKGNIVPLIHEIGLKYKELNQKKAIDFQIQIEKEEMPLFFDKEIITIILDNLISNAIKY 977
            V + ++V    +I   Y  L + K ID++ + E E M +++D   +  +  N++SNA K+
Sbjct: 902  VSENDLVSFCRQIYESYLGLAEIKNIDYRFECEAESMLVYYDPAQMEKVFYNILSNAFKF 961

Query: 978  T-EQGKITLSLYPTTRNGVTYTEIKVSDTGYGISAEALPHVFDRYYQ-ESGKHQASGTGI 1035
            T + GKIT SL    +      +I ++DTG GI A+    +F  ++Q ++G     G GI
Sbjct: 962  TPDNGKITFSL----KQSDGLAKIAITDTGIGIPADLQDKIFTNFFQVKNGAAATEGWGI 1017

Query: 1036 GLALVRNLVELHEGEIRVES----IQNEGST-FYISLL-------TDNIYPNALHGD--- 1080
            GLAL +N+++LH+GE+ V S     + +G T  ++SLL        + I  N +  D   
Sbjct: 1018 GLALAKNILDLHKGEVNVYSEPANNKRQGITILHVSLLLGKNHFSDEQIASNPIVTDKPV 1077

Query: 1081 --STKQTEEEMISEAVPEDSQNTEPETSKPILLIVEDNEDIQKYIAESFSDSFEVITGSN 1138
               +   E   I    PED +       +  +L+VEDN++++ +I +S   ++ ++ G N
Sbjct: 1078 AVGSLDHELAKIQLVAPEDKK-------RHTVLVVEDNDELRDFIVQSLKHTYHILEGKN 1130

Query: 1139 GEEGKQQALNRIPDIIVSDIMMPVMDGITLCRQLKEDVRTSHIPVILLTAKDSLQDKEEG 1198
            G  G + A   +PDI+VSD+ MP ++G  LC++LK++  T+HIPVI+LTA  S   + +G
Sbjct: 1131 GLVGWEVATEHVPDIVVSDVTMPELNGFELCQRLKQEETTNHIPVIMLTAMASHVHQIDG 1190

Query: 1199 YEVGADSYLTKPFSASLLRSRINNLLDSRKKLIAQF-QQTGTNHNPNSHLDEKRSIITEA 1257
             E GAD Y+TKPFS  +L   I NLL  R++L  ++ +Q   N          R + T  
Sbjct: 1191 LEAGADVYITKPFSIQVLELSIRNLLQGREELRQKYIKQIMLN---------PRKLET-- 1239

Query: 1258 LSKLDNEFIEKITQLVEDNLSSEKIDITYLSDKMCMSGSTLYRKMKALTGLSTNEYIRKV 1317
             +  + +F+ ++ QL+ED +   + ++  L D++ MS + LY+K+KALTGLS +++I+  
Sbjct: 1240 -ASPEEKFLNRLMQLIEDGMEDPEFNVGGLVDQIGMSQTVLYKKIKALTGLSISDFIKSQ 1298

Query: 1318 KMQNAERLLLEGKYNISEIAYKIGMNSTGYFRQCFKDEFGVSPSDY 1363
            +++ A +LL + K NI+E+AY +G N   YF + F+ +FGV+PS+Y
Sbjct: 1299 RLKRAAQLLNDHKMNIAEVAYSVGFNDRKYFSKEFRKQFGVAPSEY 1344