Pairwise Alignments

Query, 1376 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  604 bits (1557), Expect = e-176
 Identities = 412/1399 (29%), Positives = 704/1399 (50%), Gaps = 107/1399 (7%)

Query: 2    KTYIAAFFLLLSA--TFVAAHPYLIQRLGIEQGLSNNYVLSITQDKQGFLWFATEEGLNK 59
            KT    FFL +     F  +    ++ LG+E GLSNN V S+  D  GF+W  T +GLN+
Sbjct: 7    KTACFIFFLWMGTGICFAQSTAIPLKYLGVESGLSNNVVNSLYLDHFGFMWMGTYDGLNR 66

Query: 60   FDGTRFITYYKEEQSSSVQSITGNELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVY 119
            +DG  F  +          S+  N +  +  D    V W+ TQ+ G++ Y+Y    F   
Sbjct: 67   YDGYHFKVF--RNGWGDEHSLVNNHITVLNGDAKNRV-WVGTQK-GISYYDYADSRFHQL 122

Query: 120  QYNPEDPQSLITNDVTHITSSVQAGKGL--WVCTYYRGIEYLDIATGKFTHYNKSTVPAL 177
             Y  +  +    N+V++  +S+   + L  +V T  +G+  L          N S    +
Sbjct: 123  IYLDKGRK----NEVSYAINSIAISQALAVYVATEEKGLFMLK--------KNSSLAERI 170

Query: 178  PSEQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPG--NDVRCIYK 235
            P  + +  T      LYI   +     L + D  +  +  D      +    + V CI K
Sbjct: 171  PFGKNFDFTVKA---LYID--DDQTLWLFIKDVGLCKYDKDQNKVRLVTAALSSVTCITK 225

Query: 236  DTNGNIWIGTSKGLALFNANTETFTNF--HNNPGNIHGALSSYIFSIKQLKDNKLWIATE 293
            DT   +W+GT +GL  F+    + + F  H N  NI G L          +  KLWI+T+
Sbjct: 226  DTKQTLWLGTERGLFQFDKVKASISKFNQHLNNENIMGLLLD--------RQQKLWISTD 277

Query: 294  LNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGIN 353
              G+ + D ++         +  ++  G     LS+ S   +++D  +  WI T  GG+N
Sbjct: 278  GGGVAVYDTKKQ--------KTSYLSAGKEKGLLSSNSVAQVYEDHESRKWIATLRGGVN 329

Query: 354  FISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRV-A 412
             I      F T  + P + N  SL N  V S  +D    +WIGTDGGG++V+       A
Sbjct: 330  IIDTENEQFTTIKHDPLKSN--SLINNFVLSFSEDENKNIWIGTDGGGLSVWNRKLNTFA 387

Query: 413  IYNKEN--RELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNEL---- 466
             Y K +    L SN V   L D++ N+W  ++ G I  +N    KF              
Sbjct: 388  NYAKTSDPNSLTSNFVTSILNDADHNVWVASFSGGIDRFNKTTGKFVHYNCYNTSKGVDD 447

Query: 467  LDVRVFYEDKNKKIWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW 526
            +++   Y+DK + IW+GT  G  +      K I  ++  +++L +  + S+ QDS+GR W
Sbjct: 448  INIWKLYQDKQQNIWVGTTKGGALYRY--NKSIDKFELFDTKLKD--IHSLFQDSKGRLW 503

Query: 527  IGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCF-PSAR 584
             G +   +     ++  V K + Y    +  I  I      Q+W+ T G GL+ F P  +
Sbjct: 504  AGNYTELI-----EIDPVNKKHNYTKI-NFAIRAIQEDFNHQIWIGTEGGGLLLFDPETK 557

Query: 585  NFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCFYTYDHSNNIPQGS 644
                 +  + +GLP+  +  I +D  GN+W ST  G+S +      F  Y  ++ +    
Sbjct: 558  KIKRYI--QSDGLPSNSVLNILQDAQGNLWCSTYNGLSRFDVRHHSFKNYYATDGLQSNQ 615

Query: 645  FISGCVTKDHNGLIYFGSINGLCFFNPDIAINSPQIPPVVITKVRIPGRLTSREK--NET 702
            F      K  NG   FG I G   F+PD    + +IP +V+T  RI      ++   N+ 
Sbjct: 616  FNYNAALKLANGNFLFGGIGGFNLFSPDSIKKNKRIPKMVLTDFRINNIPLDQDSAYNDI 675

Query: 703  AIPISEGEIELTHEQNSFNLTFNVQDYSLANQVEYAYMLKGLENSWYTINEQNSVTFRNI 762
            ++ I+   IE+       ++ +   ++S  +Q+ YAY L+G +  W  +N+ ++  +  +
Sbjct: 676  SV-INLARIEIPFSDAVISIDYAAIEFSFQDQISYAYYLEGWDRDWNYVNKLSTAYYSRL 734

Query: 763  PPGKYEFLVKARLHNQDWSEDTTSLRIHINPPLWLTWWAKLIYILITISIIYTIIHAYKK 822
              G+Y+  +K+      WS +   + I I PP + TWWA  IY++I  SI Y       +
Sbjct: 735  NEGEYKLHIKSTDTEGAWSNNEKIVVIRILPPWYRTWWAYTIYLIIGSSIFYLFQTYRNR 794

Query: 823  KIDLESLYTLEKKNHEQEQELNQERLRFYTNITHELRTPLTLILGPLED--MQKDTSLPT 880
            +  L+    +     E+E++LN+++L F+TNI+HELRTPLTLI+ P++D  ++KD   P 
Sbjct: 795  QRRLKHEVEITNLKMEREKDLNEKKLNFFTNISHELRTPLTLIVNPIKDIILKKD---PG 851

Query: 881  RQAQKLSVIHLSALRLLNLINQILEFRKTETQNKKLCVCKGNIVPLIHEIGLKYKELNQK 940
             +   L++++ ++ RLL+L++Q+L FRKTE++N  L + + N+    +EI L +  L ++
Sbjct: 852  PEKNDLNIVYRNSRRLLSLVDQLLLFRKTESENDTLKIVRINLYKFTNEIFLCFNYLAKQ 911

Query: 941  KAIDFQIQIEKEEMPLFFDKEIITIILDNLISNAIKYTEQGK-ITLSLYPTTRNGVTYTE 999
              ID+  + E+EE+ ++ DK+ + I+  NL+SNA+K+T +G  +  S+ P         +
Sbjct: 912  NHIDYTFECEEEELDIYADKDKLEIVFFNLLSNALKFTPKGGFVKFSVKPLGMR----VQ 967

Query: 1000 IKVSDTGYGISAEALPHVFDRYYQE-SGKHQASGTGIGLALVRNLVELHEGEIRVESIQN 1058
            I+VSD+G GI A     +FD++Y+  S +    G GIGL L +N VELH+G+I   S Q 
Sbjct: 968  IEVSDSGPGIPAHVGEKLFDKFYKVMSNESLKMGFGIGLYLAKNFVELHKGKISFRSNQG 1027

Query: 1059 EGSTFYISLLTDNIYPNALHGDSTKQTEEEMISEAVP--EDSQNTEPE---------TSK 1107
             G+ F I +      PN  H     Q E   ++E +   E+++N + E         +  
Sbjct: 1028 MGTIFLIDIPVGE--PNLQHS-GVFQNELTYVNELIAQEEEAENNDTEHVGNLQLLISDL 1084

Query: 1108 PILLIVEDNEDIQKYIAESFSDSFEVITGSNGEEGKQQALNRIPDIIVSDIMMPVMDGIT 1167
              +L+++DN +I  YI   F ++F++    NG +G ++    +PDI++SD+ M  ++GI 
Sbjct: 1085 HSILVIDDNPEIIDYIRHIFQENFKIYKAENGTDGLKRCKEYLPDIVISDVNMDGLNGIE 1144

Query: 1168 LCRQLKEDVRTSHIPVILLTAKDSLQDKEEGYEVGADSYLTKPFSASLLRSRINNLLDSR 1227
            LC+ +K+D   SHIPVILLT   S + K +G EVGA  +++KPF   L  ++IN+++ +R
Sbjct: 1145 LCKAIKDDSALSHIPVILLTGDPSPEVKLKGIEVGAYDFISKPFDRELFTAKINSIIKNR 1204

Query: 1228 KKLIAQFQQTGTNHNPNSHLDEKRSIITEALSKLDNEFIEKITQLVEDNLSSEKIDITYL 1287
              L + F    T  +               +S+ D  F++K   ++E+NL  +  ++  L
Sbjct: 1205 TNLQSYFYNEITLKSD-----------AHKVSQEDKGFLQKCIMIIEENLMEDSFNVKIL 1253

Query: 1288 SDKMCMSGSTLYRKMKALTGLSTNEYIRKVKMQNAERLLLEGKYNISEIAYKIGMNSTGY 1347
            +  + MS S LY+++KA +G S N +IR ++++ A  LL+    NI+E A+++G+N + Y
Sbjct: 1254 ASDLGMSHSNLYKRIKATSGQSVNGFIRFIRLRKAAELLINTNLNINEAAFRVGINDSKY 1313

Query: 1348 FRQCFKDEFGVSPSDYLKQ 1366
            FR+ F+  F ++PS+++K+
Sbjct: 1314 FREQFQKLFKLTPSEFIKK 1332